Showing : Genomics • reset
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Job: Bioinformatics postdoc position at Penn State University
postdoc Computational Bioinformatics Biology Genomics
2.5 years ago yuzun • 0
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BioC packages in cancer genomics
genomics cancer
updated 2.7 years ago by ★ 4.0k • written 2.7 years ago by ▴ 670
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Job: Four Openings for Doctoral Researchers at the University of Helsinki
genomics bioinformatics MolecularMedicine LifeSciences
2.8 years ago bram.berntzen • 0
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Job: PhD Positions in Computational Research, Data Science and Artificial Intelligence at the German Cancer Research Center (DKFZ)
cancer bioinformatics proteomics genomics phd
2.9 years ago DKFZ International PhD Program ▴ 10
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About normalization of the datasets from Harmonized TCGA data
TCGAbiolinks Proteomics GENOMICS bioinformatics
3.3 years ago qiz218591 • 0
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Job: 'Omics data analyst for HPCBio, University of Illinois
Metagenomics GenomicVariation Genomics RNASeq ChIPSeq
3.3 years ago • updated 3.2 years ago Jenny Drnevich ★ 2.0k
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Job: PhD Positions in Computational Research, Data Science and Artificial Intelligence at the German Cancer Research Center (DKFZ)
phd cancer genomics proteomics bioinformatics
3.5 years ago DKFZ International PhD Program ▴ 10
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Job: Tenure-track Group Leader Positions in Computational Biology and Biological Chemistry
bioinformatics genomics proteomics biologicalchemistry sequencing
3.8 years ago Robert Castelo ★ 3.4k
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Job: Bioinformatics postdoc in comparative genomics
single-cell evolution Genomics Postdoc
4.0 years ago henrik.kaessmann • 0
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Job: Research Scientists/Postdoctoral Candidates/Computational Biologists and Programmers excited about computational challenges in modeling CRISPR genome…
CRISPR SingleCell Genomics
4.1 years ago lpinello • 0
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packages for integrative genomics
genomics integrative GenomicSequence
4.2 years ago Bogdan ▴ 670
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Job: Computational Biologist at Chinook Therapeutics
RNASeq Bioconductor Genomics
written 4.2 years ago by • 0
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Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
5.0 years ago Vincent J. Carey, Jr. 6.7k
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Job: Postdoctoral Fellow position in Computational/Statistical Epigenomics @ Moffitt Cancer Center, Tampa, FL
genomics bioinformatics data science cancer research tampa Job
5.3 years ago tengmx • 0
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
7.3 years ago • updated 4.9 years ago Luo Weijun ★ 1.6k
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Job: Post-Doctoral Research Fellow, Cancer Genomics
genomics seattle bioinformatics data science statistics Job
5.4 years ago Fred Hutch (Recruiting) ▴ 40
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Job: 3.5 year cancer data scientist postdoc @ UEA, Norwich, UK
prostate cancer machine learning data science genomics Job
6.0 years ago • updated 5.8 years ago Daniel Brewer ▴ 100
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Job: postdoc position in computational cancer biology in Milan, Italy
cancer networks genomics epigenomics Job
5.9 years ago • updated 5.8 years ago marschaefer • 0
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
6.7 years ago • updated 5.9 years ago Luo Weijun ★ 1.6k
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Job: Bionformatician in personalized oncotherapy (BEL)
job bioinformatician immunotherapy genomics transcriptomics Job
5.9 years ago cedric • 0
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Job: Bioinformatics Analyst II, Genomics Shared Resource - Fred Hutchinson Cancer Research Center, Seattle, WA
bioinformatics seattle full-time genomics Job
6.0 years ago Fred Hutch (Recruiting) ▴ 40
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Job: PhD Studentship in Computational Biology and Machine Learning @ University of Cambridge (application deadline November 15th 2019)
cancer genomics deep learning computational biology Job
6.1 years ago • updated 6.0 years ago Shamith.Samarajiwa ▴ 180
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Job: Bioinformatician: NEW YORK CITY - Institute for Data Science and Genomic Technology, Mount Sinai School of Medicine
job bioinformatician systems biology microbiome genomics Job
6.0 years ago supindab ▴ 10
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Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
6.1 years ago Laurent Gatto 1.6k
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Job: Bioinformatics Analyst II, Genomics Shared Resource (Seattle, WA)
GENOMICS BIOINFORMATICS SEATTLE R PYTHON Job
6.2 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Bioinformatics Scientist - BC Cancer Research Center, Vancouver, B
genomics analysis bioinformatics Job
6.4 years ago jmaanaki • 0
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Job: Research Assistant position (Fixed Term -12 months initially - application deadline 9th June) in Machine Learning & Computational Cancer Genomics @ …
cancer deep learning genomics Job
6.5 years ago • updated 6.4 years ago Shamith.Samarajiwa ▴ 180
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Job: Statistician I - Department of Data Sciences, Dana-Farber Cancer Institute
job biostatistics data science genomics Job
6.6 years ago Patrick Kimes ▴ 10
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Job: Variant Curator/ Bioinformatics Scientist
genomics Job
6.7 years ago shira.rockowitz ▴ 10
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Job: Computational Biology / Genomics Internship at Denali Therapeutics
internship genomics genetics Job
6.7 years ago Steve Lianoglou ★ 13k
2
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Job: Research Fellow, Computational Cancer Genomics (University College London)
cancer genomics machine learning data integration multi-omics Job
6.7 years ago msecrier ▴ 20
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1.3k
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Job: Postdoc in Bioinformatics (UCSF Benioff Children's Hospital Oakland)
Bioinformatics RNA-seq Postdoc Genomics Statistical model Job
6.8 years ago djawaheer • 0
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2.1k
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Job: Postdoctoral Scientist position at intersection of Single-Cell Cancer Genomics, Data Science and Bioconductor Software Development
job single-cell data science cancer genomics Job
6.8 years ago Stephanie Hicks ▴ 80
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Job: Stipendium Hungaricum Fellowship with the Computational Biology Group of Semmelweis University
cancer genomics job budapest bioinformatics Job
6.9 years ago Endre Sebestyén ▴ 70
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Job: 2 Postdoc and 2 PhD positions in Regulatory genomics / Rare disease Gagneur lab, TU Munich
genomics genetics machine learning Job
7.0 years ago gagneur ▴ 10
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Job: Postdoc in Population Genomics - UC Davis
bioinformatics evolution sequencing genome analysis genomics Job
7.0 years ago hschmidt • 0
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News: Gene Ontology Official Workshop - Montreal, October 16, 2018
gene ontology go ontology bioinformatics genomics News
7.1 years ago laurent.albou • 0
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Job: Postdoctoral Associate - Cancer Computational Biology
cancer genomics xenograph cloud Job
7.3 years ago tyler.chukwu • 0
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Job: Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
genetics job biostatistics genomics bioinformatics Job
7.6 years ago xzhousph • 0
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Job: Biostatistician III @ Duke University
rnaseq precision medicine biomarker genomics Job
7.6 years ago ram330 • 0
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Error in DESeqDataSet(se, design = design, ignoreRank) : all variables in design formula must be columns in colData
deseq2 R genomics
7.7 years ago mokunf • 0
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Job: PhD opportunity in Cambridge (Computational Biology and Data Science)
cancer deep learning genomics Job computational biology
8.1 years ago • updated 8.0 years ago Shamith.Samarajiwa ▴ 180
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Job: Computational Biologist position in CRUK Manchester Institute, UK
ngs prostate cancer genomics computational biology bioinformatician job Job
8.3 years ago huisun.leong ▴ 10
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Job: postdoc 3yrs bioinformatics bacterial population genomics: Wellington, New Zealand
bacteria evolution population genomics Job
8.3 years ago una.ren • 0
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Job: Postdoc in Bioinformatics for Cancer Genomics
cancer genomics bioinformatics machine learning next-generation sequencing Job
8.4 years ago yang4414 • 0
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1.6k
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Job: Expanding the impact of genomic data on drug development (Immuneering Corporation, Cambridge MA and New York NY)
computational biology drug development genomics Job
8.5 years ago mmartin ▴ 20
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2.0k
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Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
8.7 years ago • updated 8.6 years ago Luo Weijun ★ 1.6k
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1.9k
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Job: Postdoctoral Research Associate, Wellcome Trust-MRC Institute of Metabolic Science (Fixed Term)
genetics job genomics postdoc obesity Job
8.7 years ago njc65 • 0
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1.6k
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Job: Bioinformaticist, Research Programmer
R genomics statistics Job
8.7 years ago radel • 0
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1.2k
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downloading genomic raw data
.raw files raw data genomics
8.7 years ago farahqureshi5 • 0
79 results • Page 1 of 2
Recent ...
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Comment: deseq2 filter the low counts by Michael Love 43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts by empty_mt • 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
Comment: deseq2 filter the low counts by Michael Love 43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
Comment: deseq2 filter the low counts by empty_mt • 0
Hi Michael, My matrix consists of 36 samples from 6 treatments (6 samples/ treatment), whether I adjust prefiltering parameters or not, in…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0
That works. I didn't realize what you said about HDF5 files. We always keep those and archive the MTX files. I'm able to read in the file…
Votes
Answer: DESeq2 interactions
Answer: Important: Bioconductor Release 3.22 Delayed
A: Multi-level experiments in Limma
Answer: Should voomWithQualityWeights still be used when the sample-specific weights var
Answer: DESeq2 for candidate gene analysis
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