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News: informal meeting of R users from the Basel area
R News
9.3 years ago Hotz, Hans-Rudolf ▴ 400
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1.6k
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News: New Bioconductor Meetup Group in Boston -- first meeting September 6 2016
meetup bioconductor boston longwood News
9.3 years ago Joseph Nathaniel Paulson ▴ 280
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News: Ensembl release 85 is out!
ensembl biomart release85 ensembl release mart News
9.3 years ago Thomas Maurel ▴ 800
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1.9k
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News: BioCAsia, 4th November 2016, Brisbane, Australia
conference transcription epigenomics visualization infrastructure News
9.4 years ago Matthew Ritchie ▴ 1000
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2.4k
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News: New Master of Science in Quantitative and Computational Biology at University of Trento, Italy
computational biology bioinformatics teaching master News
updated 9.4 years ago by • 0 • written 9.4 years ago by ▴ 10
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News: Conference: BioC 2016: Where Software and Biology Connect, Stanford, 24-26 June
BioC2016 Conference News
updated 9.4 years ago by 4.2k • written 9.8 years ago by 25k
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News: Workshop: microRNA Analysis Using Next-Generation Sequencing - From microRNA profiling and prediction to extensive downstream analyses
Workshop Course News
9.4 years ago adele.feuerstein • 0
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News: Announcement of a new package called bacon
software r News
9.5 years ago m.van_iterson ▴ 20
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News: New Package Submission Process
submission News
9.5 years ago Dan Tenenbaum ★ 8.2k
6
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News: New Package Submission Process
news package submit package News
updated 9.5 years ago by 25k • written 9.5 years ago by ★ 6.8k
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News: Workshop: Clinical Bioinformatics as a Service, at ECCB 2016 - register till 29 May
workshop News
9.6 years ago • updated 9.5 years ago Wolfgang Huber ★ 13k
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News: Bioconductor 3.3 is released
release announcement News
9.6 years ago Dan Tenenbaum ★ 8.2k
4
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1
reply
1.4k
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News: About the recent flurry of spam posts
security spam News
9.6 years ago Dan Tenenbaum ★ 8.2k
4
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9
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3.9k
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News: Ensembl release 84 is out!
ensembl mart release84 biomart ensembl release News
updated 9.6 years ago by ▴ 20 • written 9.7 years ago by ▴ 800
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News: Bioconductor-related papers -- special F1000Research collection for Bioc2016
publication workflows benchmark teaching News
updated 9.6 years ago by ▴ 10 • written 9.7 years ago by ★ 13k
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News: Course: Analysis of RNA-seq and ChIP-seq data, March 29th - April 1st, Oeiras, Portugal
Course workshop News
9.7 years ago Mark Dunning ★ 1.1k
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1
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1.4k
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News: Bioconductor 3.3 release schedule
release schedule News
9.8 years ago • updated 9.7 years ago Dan Tenenbaum ★ 8.2k
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1.8k
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News: New Package Submission Deadline
Packages News
9.7 years ago Martin Morgan 25k
3
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News: Course: Statistics and Computing in Genome Data Science, July 10-15, 2016
course training News
9.8 years ago Martin Morgan 25k
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News: Announcing short course in computational proteomics, May 2-6, 2016, Boston MA
proteomics tutorial mass spectrometry computational biology News
9.8 years ago Olga Vitek ▴ 40
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News: AnnotationHub server downtime - Friday, Feb 5, 12:00PM-4:00PM PST
downtime annotationhub News
9.8 years ago Dan Tenenbaum ★ 8.2k
1
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News: Announcing the EnrichmentBrowser 2.0
genesetenrichment functional enrichment enrichmentbrowser News
9.8 years ago Ludwig Geistlinger ▴ 70
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News: bioconductor.org scheduled downtime, Tuesday, January 19th, 3:00PM PST
downtime News
9.9 years ago Dan Tenenbaum ★ 8.2k
5
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News: Bioconductor Newsletter: January 2016
news newsletter bioconductor News
9.9 years ago Valerie Obenchain ★ 6.8k
13
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1
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3.4k
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News: Updated Bioconductor Package Submission Policy
package submission News
9.9 years ago Martin Morgan 25k
0
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1.3k
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News: bioconductor.org scheduled downtime, Thursday, December 31st, 12:01PM PST
downtime News
9.9 years ago Dan Tenenbaum ★ 8.2k
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News: Ensembl 83 is out!
ensemble mart ensembl biomart ensembl release News
10.0 years ago amonida ▴ 20
6
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News: F1000 research sponsored prize for contribution to Support forum
news News
10.0 years ago Mark Dunning ★ 1.1k
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971
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News: AnnotationHub downtime Wed 11/4
news News
10.1 years ago Dan Tenenbaum ★ 8.2k
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News: PLEASE READ: devel packages in release channel
news News
10.1 years ago Dan Tenenbaum ★ 8.2k
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News: European Bioconductor Developers Meeting: Cambridge 7/8th December 2015
developers conference workshop News
updated 10.1 years ago by 1.6k • written 10.2 years ago by ★ 1.1k
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News: Bug found and fixed in bumphunter's bootstrap method
bumphunter News
10.1 years ago rafa ▴ 60
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10
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News: Bioconductor 3.2 is released!
news News
updated 10.1 years ago by ▴ 40 • written 10.1 years ago by ★ 8.2k
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News: Ensembl GRCh37 release 82 - second data update
ensembl biomart News grch37 GRCh37
10.1 years ago amonida ▴ 20
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News: C1omics: single-cell omics methods and applications, Manchester 24-25 Nov 2015
single cell conference workshop News
10.1 years ago Wolfgang Huber ★ 13k
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News: IPI numbers in annotation packages
annotation proteomics uniprot.ws News
10.1 years ago James W. MacDonald 68k
2
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944
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News: Bioconductor Newsletter - October 2015
bioconductor news newsletter News
10.1 years ago Valerie Obenchain ★ 6.8k
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1.5k
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News: Ensembl release 82 is out!
biomart ensembl release82 variation mouse News
10.2 years ago Thomas Maurel ▴ 800
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0
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946
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News: new Bioconductor team members
news bioconductor News
updated 10.2 years ago by ★ 8.2k • written 10.2 years ago by ★ 6.8k
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News: BMC Source Code for Biology and Medicine: R/Bioconductor Workflows Section is calling for papers
workflows publish News
10.2 years ago Levi Waldron ★ 1.1k
2
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News: Gencode GFF3 and FASTA files now available via AnnotationHub
AnnotationHub Gencode GFF3 FASTA News
10.2 years ago Sonali Arora ▴ 390
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News: Call for papers: Special issue on Statistical and Computational methods for genomics and integrative genomics
news call News
10.2 years ago rancoita.paola • 0
3
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News: BioCAsia, 8 Sept 2015, Tokyo
sequencing transcription epigenomics visualization infrastructure News
10.4 years ago • updated 10.3 years ago Matthew Ritchie ▴ 1000
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1.5k
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News: gwascat package updated: new features in devel branch
GWAS genetic epidemiology SNP News
10.3 years ago Vincent J. Carey, Jr. 6.7k
5
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News: Bioc2015 conference ongoing now.
bioconductor conference News
10.3 years ago Sean Davis 21k
5
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2
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3.5k
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News: Ensembl release 81 is out!
human mouse GRCh38 biomart Ensembl News
updated 10.4 years ago by ▴ 390 • written 10.4 years ago by ▴ 800
6
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News: BioC 2015 Annual Conference
BioC2015 News
10.6 years ago • updated 10.4 years ago Martin Morgan 25k
0
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1.3k
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News: New Bioconductor channel on F1000Research
bioconductor news News
10.4 years ago Sean Davis 21k
2
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1.0k
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News: Bioconductor Newsletter - July 2015
newsletter news News
10.4 years ago Valerie Obenchain ★ 6.8k
4
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2
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News: Announcing new test coverage shields
test coverage News
10.4 years ago Dan Tenenbaum ★ 8.2k
345 results • Page 6 of 7
Recent ...
Replies
Answer: Finding duplicated entries in GRangesList by Kevin Blighe ★ 4.0k
The duplicated and unique functions operate element-wise on GRangesList objects. This means that they apply the respective function to each…
Answer: DESeq2 on non-RNASeq counts data by Kevin Blighe ★ 4.0k
The use of DESeq2 for count data from artificial sequences is acceptable, as the program models counts via a negative binomial distribution…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hello Rui Tang, The buffer overflow error in featureCounts that you encountered is likely due to a compatibility issue between the Subre…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
The issue that you describe with the tumor mutational burden (TMB) plots appearing linear and lacking consistent TMB values across samples …
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Kevin Blighe ★ 4.0k
There are alternative explanations for why these samples are so similar. The similarity could result from low biological variability in gen…
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Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
Answer: Identifying differentially expressed genes in individual samples from a large co
Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction
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