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Getting CDSCHROM values from ENSEMBL/SYMBOL keys using mapIds from TxDb.Hsapiens.UCSC.hg19.knownGene
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3.3 years ago • updated 3.2 years ago
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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
•
0
I am working with mouse data. I don't know how to do this, but I will go through it. Can you help me with the second question?
how do we …
Comment: [Mfuzz] Error in cmeans(exprs(eset)
by
Caio
•
0
You can have this problem (lines with variance equal to zero) when you run experiments and obtain the data with more samples and use fewer …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
The left plot indicates you should use genome segmentation. It is what is called "nonstationary" meaning it looks like there are distinct r…
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
gene_bioconductor
▴
10
Thanks for your thoughtful and detailed comment, Gordon
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
•
0
I looked into the genomic distributions. Please see the screenshot attatched ![ distrubution for female loci, boot1 and boot2][1]
how do …
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