Showing : STATISTICS • reset
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Job: Statistics Lectureships at St Andrews
JobPosting computational statistics
7 months ago Andy Lynch ▴ 120
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0
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423
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multipollutant models
statistics Regression r limma
10 months ago Jitendra ▴ 10
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1
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478
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DEseq2 : Complex design with a mixture of male and female mice
statistics DESeq2
updated 10 months ago by 42k • written 10 months ago by • 0
1
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1
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515
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Further analysis after limma regression output
statistics Epigenetics limma
updated 12 months ago by 67k • written 12 months ago by ▴ 10
1
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1
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2.0k
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FPKM t-test vs DEseq2
DESeq2 statistics rna-seq
updated 17 months ago by ★ 4.5k • written 17 months ago by • 0
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3
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1.4k
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batch effect in EPIC array data
statistics Epigenetics R
updated 19 months ago by ▴ 750 • written 19 months ago by ▴ 10
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791
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Job: PhD position in Bioinformatics in Jena
Statistics ComputationalBiology Aging MachineLearning
21 months ago alena.vanboemmel • 0
0
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2
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891
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Results analysis of differential gene expression using DESeq2 package
RnaSeqSampleSize statistics DESeq2
updated 22 months ago by ★ 1.4k • written 22 months ago by • 0
1
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0
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804
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Statistical test for genomic annotation by ChIPseeker
statistics PeakAnnotation ChIPseeker GuangchuangYu
2.2 years ago arisarkar88 ▴ 40
1
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0
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916
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Job: Lecturer in Statistics - School of Mathematics and Statistics - University of St Andrews
computational teaching statistics research
2.2 years ago Andy Lynch ▴ 120
1
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0
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911
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Job: Research Fellow in Prostate Cancer Proteomics (Bioinformatics/Stats/Data Analysis) - University of St Andrews
Multiomics Proteomics Cancer Statistics Bioinformatics
2.2 years ago Andy Lynch ▴ 120
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6
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1.5k
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regression analysis for epic array methylation data using limma
limma Epigenetics STATISTICS R
2.4 years ago Jitendra ▴ 10
0
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3
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1.7k
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Reading large file (15GB) in R
R Rstudio Bioconducter statistics
updated 2.6 years ago by 21k • written 2.7 years ago by ▴ 10
3
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5
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1.5k
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P adjusted values in Deseq2
DESeq2 Statistics
written 3.7 years ago by • 0
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2
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1.2k
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News: Ascona Workshop “Biological systems: from first principles to data-​driven modelling and back” 27. 3. - 1. 4. 2022
theory modeling statistics ascona Workshop
3.0 years ago • updated 20 months ago Wolfgang Huber ★ 13k
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1.1k
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Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
singlecellRNA-Seq pathview statistics R
3.5 years ago • updated 3.4 years ago Luo Weijun ★ 1.6k
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1.1k
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Job: Bioinformatician at MiroBio, Oxford, UK
Transcriptomics Bioconductor Statistics Job Biocon
3.6 years ago m.jackson • 0
0
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1.0k
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Job: Scientist/Senior Scientist, Statistical Geneticist
Sequencing Genetics GeneticsPed statistics
3.7 years ago António Miguel de Jesus Domingues ▴ 510
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1.2k
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Job: Proteomics Bioinformatician
JobPosting Proteomics Statistics Job
3.8 years ago Laura • 0
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1.0k
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Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
R statistics pathview singlecellRNA-Seq
3.9 years ago • updated 3.5 years ago Luo Weijun ★ 1.6k
1
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2
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1.3k
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Re-calculation of Padj (P adjusted value)
statistics Benjamini–Hochberg procedure deseq2
updated 4.0 years ago by 42k • written 4.0 years ago by ▴ 60
2
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998
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Job: Multiple open positions in biomedical statistics at Eurac Research, Italy
epidemiology statistics bioinformatics Job
4.0 years ago Johannes Rainer ★ 2.1k
0
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0
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870
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Job: Two Bioinformatics Fellowship Positions at US EPA
bioinformatics toxicology Job sequenicng statistics
4.2 years ago • updated 3.9 years ago whduke • 0
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2.0k
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
6.2 years ago • updated 3.9 years ago Luo Weijun ★ 1.6k
1
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1.1k
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Job: Post-Doctoral Research Fellow, Cancer Genomics
genomics seattle bioinformatics data science statistics Job
4.4 years ago Fred Hutch (Recruiting) ▴ 40
3
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2.4k
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Job: Postdoctoral Scientist, Statistical Bioinformatics and Proteomics, WEHI Australia
job proteomics Job statistics
4.9 years ago • updated 4.8 years ago Gordon Smyth 51k
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1.4k
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
5.7 years ago • updated 4.8 years ago Luo Weijun ★ 1.6k
0
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1
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925
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How to handle batch effect and interaction with experimental variables
deseq2 statistics differential expression
4.9 years ago A • 0
0
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1
reply
887
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Exclude interaction terms from the design
deseq2 statistics modelling
updated 5.0 years ago by 42k • written 5.0 years ago by • 0
2
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2
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3.4k
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How adjusted p-values are calculated in limma
limma r transcriptomics FDR statistics
updated 5.0 years ago by 51k • written 5.0 years ago by ▴ 10
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1.1k
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Proteomics data analysis with DEP no replicates
DEP Proteomics Statistics limma
5.1 years ago tatabox • 0
3
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3
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1.6k
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Using alternative LFC shrinkage methods for computing p-values in DESeq2
deseq2 apeglm statistics
updated 5.3 years ago by 42k • written 5.3 years ago by • 0
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1.1k
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Efficient resampling in GENESIS or another Bioconductor GWAS package to obtain empirical p-values?
GENESIS GWAS resampling resample statistics
5.7 years ago naglemi ▴ 10
0
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0
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888
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package for mismatch distribution?
genetics statistics
5.7 years ago myriam.croze07 • 0
1
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6
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3.1k
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DESeq2 unbalanced sample size
deseq2 bioconductor bioinformatics statistics
updated 19 months ago by 42k • written 5.8 years ago by • 0
1
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2
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1.1k
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Newbie to all of this
bioconductor statistics
6.0 years ago sportwoo • 0
8
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8
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7.4k
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Voom transformation from counts and normalization to negative values
rnaseq voom limma tcga statistics
updated 6.0 years ago by ★ 7.9k • written 6.0 years ago by ▴ 60
1
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2
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1.1k
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What to do with microarray probes that catch multiple genes?
affymetrix microarrays microarray probe statistics
updated 6.1 years ago by 67k • written 6.1 years ago by • 0
1
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4
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1.4k
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Do the gene set statistics of the ROAST paper correspond to those implemented in the .roastEffects R function?
limma roast statistics source code gene set testing
6.1 years ago Andrea Carenzo • 0
0
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2
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1.2k
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comparing two GOstats result lists
gostats statistics
updated 6.3 years ago by 67k • written 6.3 years ago by ▴ 30
1
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0
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1.3k
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Job: Statistical Research Associate
biostatistics statistics sas git assay Job
6.4 years ago Fred Hutch (Recruiting) ▴ 40
0
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0
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1.3k
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DSS DMLTest Prior Estimate of theta dispersion
DSS dmltest bayesian statistics methylation
6.5 years ago floriandeckert ▴ 30
0
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0
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1.3k
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News: SCANGEN: Single-cell cancer genomics workshop at ISMB 2018
single cell cancer genomics statistics News
6.5 years ago kieranrcampbell ▴ 50
0
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0
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1.3k
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Two questions about pathifier package
pathways statistics microarray
6.7 years ago arronar • 0
27
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7
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12k
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Effect of lfcThreshold on p-value in DESeq2
deseq2 rnaseq statistics
updated 12 months ago by ▴ 10 • written 7.0 years ago by ▴ 40
2
votes
4
replies
1.3k
views
Removing batch effect on edgeR when interactons are looked at
rnaseq edger statistics model matrix
updated 7.0 years ago by ★ 13k • written 7.0 years ago by ▴ 90
0
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0
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1.3k
views
Assigning stats to differential peak locations relative to TSS
chipseeker chipseq statistics
7.0 years ago rbronste ▴ 60
0
votes
0
replies
1.7k
views
Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
7.6 years ago • updated 7.5 years ago Luo Weijun ★ 1.6k
1
vote
2
replies
2.2k
views
how to perform pre ranked GSEA in R?
r microarray statistics GSEA
updated 7.6 years ago by • 0 • written 9.6 years ago by ▴ 80
0
votes
0
replies
1.4k
views
Job: Bioinformaticist, Research Programmer
R genomics statistics Job
7.6 years ago radel • 0
50 results • Page 1 of 1
Recent ...
Replies
Comment: Bioconductor Digest, Vol 68, Issue 7 by parikapain1353 • 0
Hi [melon sandbox][1], is there any new update to this file? [1]: https://melon-sandbox.com
Comment: AnnotationHub not working by 01icy9ird1e • 0
Hey @[geometry dash wave][1], where is the output, please? [1]: https://geometrydashwave.com
Answer: Which input data is acceptable for MAST? by Andrew_McDavid ▴ 270
Not too familiar with SCT v2. If it also has a point-mass at zero and the non-zero component is roughly-symmetric, then it might work ok w…
Answer: segfault when using singleR with Azimuth reference by James W. MacDonald 67k
The training step is usually faster than the classification step, so you might try running `trainSingleR` on the reference to see if that i…
Comment: Batch Effect in DESeq2, how to control, how to remove it, how to address biologi by James W. MacDonald 67k
You don't. I believe Fisher has a quote that applies here. Also, please don't add to five year old posts. Start a new one.
Votes
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Comment: Convert HGVS Representation back to Reference Genome Coordinates
Answer: How to control batch effect if Group and batch are same?
Comment: Normalization RNA-seq for multiple plates
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Popular Question to Andrew_McDavid ▴ 270
Scholar to Ryan C. Thompson ★ 7.9k
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