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Showing :
software error
•
reset
0
votes
0
replies
1.3k
views
cummeRbund error dealing with cuffdiff results
rnaseq
cummerbund
R
software error
8.7 years ago
wastdc
• 0
9
votes
2
replies
11k
views
Using RSEM with tximport and DESeq2
deseq2
tximport
software error
bug
updated 4.2 years ago by
Michael Love
43k • written 8.8 years ago by
falkohofmann
▴ 10
0
votes
0
replies
925
views
Analyze single-end reads in MMDiff2
software error
mmdiff2
8.8 years ago
cattapre
• 0
0
votes
8
replies
4.6k
views
The common error with ballgown has not been solved!
ballgown
software error
updated 8.8 years ago by
Jeff Leek
▴ 650 • written 8.8 years ago by
Sara
▴ 20
2
votes
4
replies
2.7k
views
treeio installation problem
software error
updated 3.4 years ago by
an.gorohovski
• 0 • written 8.8 years ago by
anabento
▴ 10
1
vote
5
replies
2.1k
views
Error when running getSGFeatureCounts
SGSeq
software error
updated 8.8 years ago by
Leonard Goldstein
▴ 260 • written 8.8 years ago by
jpromero
▴ 10
0
votes
1
reply
1.5k
views
seqlm installation error
software error
R
installation
updated 8.8 years ago by
Marcel Ramos
700 • written 8.8 years ago by
niutster
• 0
3
votes
2
replies
3.2k
views
Rqc - envir must be either NULL, a list, or an environment.
software error
bug
library
updated 8.8 years ago by
Welliton de Souza
▴ 70 • written 8.8 years ago by
guus.steeg
▴ 10
0
votes
0
replies
922
views
FunciSNP: an error message while running the tutorial
funcisnp
software error
8.8 years ago
alakatos
▴ 130
1
vote
2
replies
2.1k
views
Error in Biostrings with Fastafiles using the carriage return <cr>
biostrings
software error
bug
updated 8.8 years ago by
Hervé Pagès
16k • written 8.8 years ago by
zach.charlop.powers
• 0
0
votes
1
reply
772
views
Bug Report: I think there is a typo in topTags() that interferes with the p.value argument functionality.
software error
edgeR
updated 8.8 years ago by
Gordon Smyth
53k • written 8.8 years ago by
alexander.mueting139
• 0
0
votes
11
replies
3.5k
views
package 'ChAMP' demo/test code fails at champ.CNA()
software error
updated 8.8 years ago by
Yuan Tian
▴ 90 • written 10.9 years ago by
Hamid Bolouri
▴ 90
0
votes
2
replies
943
views
plotMutationSpectrum in SomaticSignatures
software error
8.8 years ago
Haiying.Kong
▴ 110
2
votes
3
replies
1.8k
views
Probable bug in GSEABase package.
software error
bug
gseabase
8.8 years ago
jcrodriguez
▴ 20
0
votes
1
reply
1.6k
views
ALL Library and ALL Data Set error
bioconductor
R
library
software error
ALL library
8.8 years ago
alyssa.ylescu
• 0
1
vote
2
replies
1.6k
views
hta20sttranscriptcluster.db is not available for R version 3.3.2
annotation
software error
updated 8.8 years ago by
James W. MacDonald
68k • written 8.8 years ago by
ricardo.martinez-zamudio
• 0
1
vote
2
replies
1.5k
views
DMRcate error in extractCoords function
software error
DMRcate
extractRanges
updated 8.8 years ago by
Tim Peters
▴ 230 • written 8.9 years ago by
Xavier Pastor
▴ 10
0
votes
5
replies
1.8k
views
Problem to install "flowClust"
package installation
software error
flowclust
8.9 years ago
cr
• 0
3
votes
3
replies
2.3k
views
Error running CellMix SampleAnalysis vignette
software error
cellmix
vignette
expressionset
8.9 years ago
gabor.halasz
• 0
1
vote
3
replies
1.0k
views
limma: bug in fitFDist()
software error
limma
updated 8.9 years ago by
Gordon Smyth
53k • written 8.9 years ago by
Rifius
• 0
1
vote
2
replies
1.2k
views
Question about Error of "biocLite.R"
software error
updated 8.9 years ago by
gregory.wargula
▴ 30 • written 8.9 years ago by
qwertyui_period@yahoo.co.jp
▴ 10
5
votes
11
replies
3.9k
views
Certificate problem with ExperimentHub / AnnotationHub
software error
curatedmetagenomicdata
annotationhub
experimenthub
updated 8.9 years ago by
Levi Waldron
★ 1.1k • written 8.9 years ago by
morganx
▴ 10
0
votes
2
replies
1.8k
views
problem when install Bioconductor
software error
updated 8.9 years ago by
Martin Morgan
25k • written 8.9 years ago by
yuanjun.ma
• 0
0
votes
1
reply
3.9k
views
cannot : source("https://bioconductor.org/biocLite.R")
software error
8.9 years ago
kc9qey
• 0
0
votes
2
replies
1.1k
views
SomaticSignatures will not install on R v.3.3.2
software error
bioconductor
mutational signature
8.9 years ago
christos.hatzis
• 0
1
vote
2
replies
2.1k
views
Multiple problems with TCGAbiolinks 2.2.6
software error
tcgabiolinks
ubuntu
updated 9.0 years ago by
Tiago Chedraoui Silva
▴ 260 • written 9.0 years ago by
lmorrill
• 0
0
votes
1
reply
1.6k
views
error when reading .mzML with xcms::xcmsSet
software error
R
mzR
xcms
9.0 years ago
buescher
• 0
0
votes
2
replies
1.7k
views
normalize.AffyBatch.vsn not expressed in vsn
software error
vsn
affy
9.0 years ago
Claudio Lottaz
▴ 40
0
votes
1
reply
1.0k
views
Error subsetting eset
software error
updated 9.0 years ago by
James W. MacDonald
68k • written 9.0 years ago by
sridhars
• 0
3
votes
2
replies
2.0k
views
How to fix ChIPPeakAnno error in adding gene names to annotated peaks?
software error
annotation
9.0 years ago
jmKeith
• 0
0
votes
0
replies
1.2k
views
Error in pr_DB$get_entry(method) : could not find function "f"
destiny
software error
bug
9.0 years ago
mrodriguezorejuela
• 0
2
votes
3
replies
7.1k
views
DESEq2 error when performing exploratory analysis with no replicates
software error
deseq2
metagenomics
updated 9.0 years ago by
Michael Love
43k • written 9.0 years ago by
pro_zac
• 0
1
vote
2
replies
3.6k
views
Corrupt Database Error When Loading qvalue() Package
qvalue
library
software error
package installation
package updates
9.0 years ago
tah340
• 0
0
votes
6
replies
3.2k
views
problem to load data into ChIPpeakAnno
software error
9.0 years ago
crisprucd
• 0
1
vote
16
replies
4.9k
views
Error: could not find function "dba"
software error
diffbind
dba
9.1 years ago • updated 9.0 years ago
mmarins
• 0
0
votes
1
reply
2.6k
views
Error with phyloseq R package with Conda install
software error
phyloseq
anaconda
written 9.1 years ago by
kpitz23
• 0
0
votes
3
replies
1.1k
views
MLSeq package error
software error
9.1 years ago
jonessara770
▴ 10
2
votes
9
replies
2.9k
views
BiocParallel not proceeding
software error
updated 9.1 years ago by
Martin Morgan
25k • written 9.1 years ago by
petyuk
▴ 70
0
votes
1
reply
15k
views
Problem with installation of org.Hs.eg.db
software error
org.hs.eg.db
updated 9.1 years ago by
Jenny Drnevich
★ 2.0k • written 9.1 years ago by
sven.schuierer
• 0
0
votes
0
replies
922
views
Meta-analysis of gene expression data by 'MetaDE'
software error
updated 9.1 years ago by
James W. MacDonald
68k • written 9.4 years ago by
mohammad.farhadian
• 0
1
vote
1
reply
1.4k
views
error in DESeq installationm
software error
updated 9.1 years ago by
James W. MacDonald
68k • written 9.1 years ago by
Jitendra
▴ 10
3
votes
2
replies
1.5k
views
DESeq2: Question regarding changes between Bioconductor 3.2 and 3.4 or recent version changes
deseq2
new version
bioconductor
software error
reproducibility
9.1 years ago
Daniel Elsner
• 0
0
votes
0
replies
884
views
Errore: subscript contains NAs - when running searchPairBSgenome in TFBTools
software error
9.1 years ago
laurabuggiotti
• 0
1
vote
9
replies
2.2k
views
IONiseR error when using the readFast5Summary function on nanopore data
ioniser
software error
bioconductor
9.1 years ago
mv340788
• 0
0
votes
1
reply
2.1k
views
Error: could not find function "msaConvert"
msa
software error
updated 9.1 years ago by
UBod
▴ 300 • written 9.1 years ago by
weiguo0113
• 0
0
votes
8
replies
2.1k
views
Error in running development version of PureCN
PureCN
software error
9.1 years ago
hustlxc
• 0
0
votes
0
replies
1.1k
views
mzR Rcpp compiler linker issue
warning message
software error
9.1 years ago
arvindkorwar77
• 0
0
votes
0
replies
927
views
maftools lollipopPlot error
software error
9.1 years ago
kelly.bolton
• 0
0
votes
1
reply
1.2k
views
error installing IRanges
software error
iranges
updated 9.1 years ago by
Martin Morgan
25k • written 9.1 years ago by
jlvillanueva84
• 0
7
votes
8
replies
3.2k
views
Very small bug in DESeq2
software error
9.1 years ago
arfranco
▴ 130
704 results • Page
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by
insurancetaaddddaxrealty
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FeatureCounts can behave differently with ONT cDNA BAM files due to long read splice patterns, and many users compare settings or presets m…
Comment: A problem occurs when running the monocle2
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e.j.aaw.g.erm
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For gamers facing technical issues or errors in complex scripts, the Redz Hub script download provides a reliable tool to optimize performa…
Answer: How can I correctly use phyloseq with Docker?
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Kevin Blighe
★ 4.0k
The Bioconductor version must be compatible with the R version. Bioconductor version 3.18 is compatible with R version 4.3. The Dockerfile …
Answer: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
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Kevin Blighe
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Your proposed code is correct and will achieve the desired outcome. The boolean filter expression `IFNg & TNFa | IFNg & IL2 | TNFa & IL2` i…
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The discrepancy between `final_exp1` and `final_exp2` could arise from several factors, despite matching dimensions. The `identical()` func…
Votes
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
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