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updated 8.0 years ago by ★ 28k • written 8.0 years ago by ▴ 10
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normalization and analysis of connected designs
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edgeR: processAmplicons crashes with large number of hairpins
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WGCNA error in network construction ?
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Genbank to Unigene IDs
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News: List of Deprecated Packages for Bioc3.18
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5.0 years ago Mozart ▴ 30
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ensembldb support for Ensembl's transcript_name column
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Generation of QSEA TCGA 450K Human Methylation Calibration Dataset
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DESeq2 in R_devel: a bug?
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DESeq2 - multifactorial design
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DESEQ2 linear model of dose
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DEseq2 time-series design.
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Using tximport on rsem files produces error while trying to read in files
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6.1 years ago stephan.emmrich ▴ 10
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RNA-seq analysis using EdgeR- I need to make sure that the codes that I use to analyze the data are correct
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updated 8.1 years ago by ★ 7.9k • written 8.2 years ago by • 0
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Incongruencies between DEXSeq and BitSeq/Cuffdiff
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updated 9.1 years ago by ▴ 760 • written 9.1 years ago by ▴ 260
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Create transcriptDb using gff3 files? - library GenomicFeatures and rtracklayer
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updated 12.1 years ago by ★ 13k • written 12.1 years ago by ▴ 230
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[Bioc] RNAseq less sensitive than microarrays? Is it a statistical issue?
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DESeqDataSetFromTximport: Error in checkSlotAssignment
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What causes this DESeq2 error at "fitting model and testing"?
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updated 9.3 years ago by ★ 13k • written 9.3 years ago by • 0
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annotation conversion from old microarray to latest Entrez and Ensembl ID
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DESeq2 : NA p values reported
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SV4Vectors DataFrame bug with haven_labelled data
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updated 17 months ago by ▴ 20 • written 17 months ago by ▴ 30
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results(dds) error: couldn't find results. you should first run DESeq()
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problems with strand in predictCoding
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45,664 results • Page 4 of 914
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Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10
Hi @marcelramos Thanks for the clarification. Yes, I have installed `org.Vdahlaie.eg.db` using the code you and Guido suggested and now i…
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@Maria Doyle[sexdolltech][1]Hosting EuroBioC provides an excellent opportunity to showcase Bioconductor and computational biology research …
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Dear Daniele, for which Ensembl release would you need the data? the most recent is 112, but if you used a different version before it wou…
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Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
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Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
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