0
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1
reply
772
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In the 'About_Annotation_Packages_org.Sc.sgd.db_3.17' columns("org.Sc.sgd.db"), the 'CHRLOC' information is not displayed. However, the 'index.txt' f…
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updated 2.1 years ago by 68k • written 2.1 years ago by • 0
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5
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4.1k
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Cannot connect to ExperimentHub server
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updated 20 months ago by • 0 • written 2.1 years ago by • 0
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It's possible to use clusterProfiler without an annotationDBI package
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2.1 years ago nromerov • 0
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3
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2.1 years ago davca • 0
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740
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updated 2.1 years ago by 4.3k • written 2.1 years ago by • 0
1
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1
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649
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Minimum datasets needed for meta analysis
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updated 2.1 years ago by ▴ 780 • written 2.1 years ago by ▴ 10
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2.1 years ago Karthik • 0
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761
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updated 2.1 years ago by 16k • written 2.1 years ago by ★ 1.6k
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biomaRtl returns multiple GO terms when filtering on a single GO term in ensembl database
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2.1 years ago henrydionne ▴ 10
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Is it appropriate to apply linear mixed models to Voom transformed data?
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2.1 years ago pl23 • 0
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2.1 years ago Joshua • 0
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1
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939
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Error in reading my csv file in minfi
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updated 2.1 years ago by ▴ 780 • written 2.1 years ago by • 0
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5
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updated 21 months ago by ▴ 110 • written 2.1 years ago by • 0
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How to find stop codons for a list of genes
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2.1 years ago Marek Gierlinski ▴ 30
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28
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Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and annotation forge
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updated 2.1 years ago by 68k • written 3.1 years ago by ▴ 10
0
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1
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815
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DESeq2 and determining effects of treatment on a priori/candidate genes from a bulk-RNAseq experiment
RNASeqData DifferentialExpression DESeq2
updated 2.1 years ago by 43k • written 2.2 years ago by ▴ 10
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DESeq2: Comparison of single clinical sample to 4 normals using tumour cohort to infer dispersion of single sample
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2.1 years ago Manthos • 0
1
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4
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Can DESeq2 be used to compare groups of genes?
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2.1 years ago pl23 • 0
0
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4
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ATACseqTFEA - preparebindingSites() for whole genome?
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updated 23 months ago by ★ 1.3k • written 2.2 years ago by • 0
0
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1
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766
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plotAvgProf - How to change labels in the facet option
ChIPseeker
updated 2.1 years ago by 68k • written 2.1 years ago by • 0
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Fail to annotate chromosome data to single cell sequencing data obtained from cellranger
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updated 2.1 years ago by ★ 5.0k • written 2.1 years ago by • 0
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4
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rhdf5: error trying to access files from S3 Cloud from NASA earthaccess
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2.1 years ago Caio • 0
1
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7
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scater runUMAP fails with error "function 'as_cholmod_sparse' not provided by package 'Matrix'"
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updated 22 months ago by 16k • written 2.2 years ago by ▴ 10
2
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ChAMP can't be found in Bioc3.18?
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2.1 years ago ramonfallon ▴ 20
0
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6
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Error when Installing BioConductor Package ('affy')
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updated 2.1 years ago by ★ 5.0k • written 3.1 years ago by • 0
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858
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SomaticSignatures normalization for trinucleotide motifs in reference genome
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2.1 years ago vasily.dobrovolsky • 0
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1
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803
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Strange behaviour in Rsubread when trimming sequences leading to a change inthe order of the reads
Rsubread
updated 2.1 years ago by 53k • written 2.2 years ago by • 0
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2.2 years ago • updated 2.1 years ago georgii.vdovin • 0
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0
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630
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GaussNorm fails to recognize flowFrames in flowSet as individual elements
flowStats
2.2 years ago mikkel.byrdal • 0
1
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3
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2.7k
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Error in the UcscTrack() in package "Gviz"
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updated 2.2 years ago by ▴ 750 • written 4.7 years ago by • 0
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0
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764
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2.2 years ago Maria Doyle ▴ 110
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1
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sampling random regions of same nucleotide composition from hg38 genome
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10
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2.0k
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Unable to locate BioMart dataset for Dog10K_Boxer_Tasha
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2.2 years ago • updated 22 months ago ScafioRuo • 0
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Calculation of ChIP-seq normalization factors with non-conventional spike-in assumptions
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2.2 years ago jared.andrews07 ▴ 30
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1
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684
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gene aligning reference
geneRecommender gene
updated 2.2 years ago by 68k • written 2.2 years ago by • 0
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0
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636
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accesing gene name RNAseq
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2.2 years ago Gülsüm • 0
3
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5
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Looking for equivalent EPIC chip v1 vs. v2 annotation variables
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1.5k
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limma + voom combine voomWithQualityWeights and duplicateCorrelation
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2.2 years ago Tyler Sagendorf ▴ 10
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1
reply
604
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DESeq2
updated 2.2 years ago by ★ 5.0k • written 2.2 years ago by • 0
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0
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Identifying populations within a FlowSOM tree
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2.2 years ago agus_rizzo • 0
1
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2
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3.3k
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trying to add SingleR label to Seurat Object fails
SingleR Seurat
updated 2.2 years ago by ★ 5.0k • written 2.2 years ago by ★ 1.5k
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4
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954
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Sign Output Values PADOG
PADOG
written 2.2 years ago by • 0
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702
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EGSEA with Affymetrix data
EGSEA
updated 2.2 years ago by 68k • written 2.2 years ago by • 0
3
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6
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Methylation data analysis
MethylationArrayData methylationArrayAnalysis
2.2 years ago aldea85 • 0
0
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2
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annotatePeak error for some problem
ChIPseeker
written 2.2 years ago by • 0
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votes
1
reply
697
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COTAN mantainance
BuildReport
updated 2.2 years ago by 4.3k • written 2.2 years ago by • 0
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0
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2.2 years ago Alexander • 0
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0
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733
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2.2 years ago shepherl 4.3k
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Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!
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