11 weeks ago • updated 9 weeks ago
Giovanni Calice
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updated 9 weeks ago by
Gordon Smyth
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10 weeks ago • updated 9 weeks ago
red_bricks
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S T
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10 weeks ago
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10 weeks ago
bocsci11
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10 weeks ago
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updated 10 weeks ago by
ATpoint
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written 11 weeks ago by
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written 6.5 years ago by
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updated 11 weeks ago by
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written 11 weeks ago by
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11 weeks ago
chris2.a.white
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updated 11 weeks ago by
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written 3 months ago by
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updated 11 weeks ago by
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written 15 months ago by
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11 weeks ago
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12 weeks ago
danalvoronov
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updated 3 months ago by
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written 2.1 years ago by
Emre
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3 months ago
michael.shapiro
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AP
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updated 3 months ago by
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written 3 months ago by
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Recent ...
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Comment: Volcano plot of scRNA-seq data not "centered"
by
Michael Love
42k
Agree with @atpoint
Depending on the "groups" in single cell, the question of DE can be not well defined without inserting additional inf…
Answer: Volcano plot of scRNA-seq data not "centered"
by
ATpoint
★
4.2k
Sounds like a normalization problem, but I am not sure how to help with that. Indeed you can use control genes, for example use the top 20%…
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
ATpoint
★
4.2k
I was talking about the command line version.
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
atan
•
0
I tried reading in the .csv version of the SAF with header = F and I'm still getting an error. I'm running:
```
counts <- featureCounts(
…
Comment: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
by
jovel_juan
▴
30
enrichPlot requirements are rather low. All what it needs is to provide few columns named specifically. I student of mine wrote the first v…
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