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0
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574
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Rgraphviz - exported (toFile) dot file loses colour and label information
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2.1 years ago sterlinggunn01 • 0
1
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2
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2.1 years ago • updated 24 months ago Levi • 0
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2.1 years ago Jitendra ▴ 10
1
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0
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updated 2.0 years ago by 43k • written 2.1 years ago by ▴ 10
0
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1000
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help with converting MSTRG tags with isoformswictanalyzer
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updated 2.1 years ago by 68k • written 2.1 years ago by • 0
0
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updated 2.1 years ago by 4.2k • written 2.1 years ago by • 0
1
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1
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634
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Minimum datasets needed for meta analysis
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updated 2.1 years ago by ▴ 780 • written 2.1 years ago by ▴ 10
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2.1 years ago Joshua • 0
0
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1
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921
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Error in reading my csv file in minfi
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updated 2.1 years ago by ▴ 780 • written 2.1 years ago by • 0
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2.1 years ago vasily.dobrovolsky • 0
0
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1
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788
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Strange behaviour in Rsubread when trimming sequences leading to a change inthe order of the reads
Rsubread
updated 2.1 years ago by 53k • written 2.1 years ago by • 0
0
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0
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615
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GaussNorm fails to recognize flowFrames in flowSet as individual elements
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2.1 years ago mikkel.byrdal • 0
0
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0
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1.0k
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Calculation of ChIP-seq normalization factors with non-conventional spike-in assumptions
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2.1 years ago jared.andrews07 ▴ 30
0
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0
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accesing gene name RNAseq
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2.1 years ago Gülsüm • 0
0
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0
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726
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2.1 years ago agus_rizzo • 0
0
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1
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677
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COTAN mantainance
BuildReport
updated 2.1 years ago by 4.2k • written 2.1 years ago by • 0
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0
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Version map cannot be validated - not mapping to new bioconductor website
Install
2.1 years ago Alexander • 0
0
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0
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498
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R/sql code to find the haplotype data from patient's rsIDs
starallele phenoTest
updated 2.1 years ago by 68k • written 2.1 years ago by • 0
0
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1
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648
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Incorrect display of Y-axis
trackViewer
updated 2.1 years ago by ★ 1.3k • written 2.1 years ago by • 0
0
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2
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919
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combat output NaN
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2.1 years ago maxixian1990 • 0
0
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1
reply
900
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DESeq2 interaction between one continuous variable and one categorical variable
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updated 2.1 years ago by ★ 13k • written 2.1 years ago by • 0
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2
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Cannot open Sysmex Partec CUbe 6 .fcs with read.FCS
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2.1 years ago mrescan • 0
0
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0
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606
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nondetects and technical replicates
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2.1 years ago Ed Siefker ▴ 230
0
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0
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612
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SGSeq how export PSI values for each typr of splice variant
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2.1 years ago Alison • 0
0
votes
3
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1.4k
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Support for installation and usage of TxDb.Hsapiens.UCSC.hg19.knownGene package in R version 4.2.2
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2.1 years ago blessybo • 0
0
votes
0
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872
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Gviz::GeneRegionTrack error with standard TxDb: "adding seqlevels to a TxDb object is not supported"
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2.1 years ago dbsgtk • 0
1
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0
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2.1 years ago yujin ▴ 10
1
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1
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955
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2.1 years ago NiKo ▴ 10
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0
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2.1 years ago Jon • 0
0
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1
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675
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Advice needed on package using online databases (fails CHECK when database is down)
Bioconductor
updated 2.1 years ago by 4.2k • written 2.1 years ago by ▴ 30
0
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0
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854
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Include or exclude N/A genes (those without any KEGG annotation) when running Wilcox test?
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2.1 years ago mch • 0
0
votes
4
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1.5k
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Mfuzz package loading issues
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2.1 years ago Jon • 0
0
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2
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869
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Can you help me generate a Bsgenome of the fusion genome of a human and HIV-1 virus?
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2.1 years ago 13273976287 • 0
2
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10
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2.4k
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Accounting for Batch effect reduces DEGs drastically
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2.1 years ago rohitsatyam102 ▴ 20
0
votes
3
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1.2k
views
determine if R package or it's dependencies functionality require internet access
biomaRt
updated 2.1 years ago by 53k • written 2.1 years ago by • 0
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votes
2
replies
1.0k
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can't update bioconductor 3.18
BioCor bioc BiocVersion
2.1 years ago feifan • 0
1
vote
2
replies
1.3k
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How do I select a subset of genes for functional enrichment(GO/KEGG) analysis from WGCNA results?
WGCNA
written 2.2 years ago by ▴ 10
0
votes
0
replies
665
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proActiv - Error in estimateSizeFactorsForMatrix when using the proActiv function
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2.2 years ago Chris • 0
0
votes
1
reply
1.5k
views
Problems when running GDC_prepare in R
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2.2 years ago leon • 0
0
votes
0
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is Dada2 biased toward a particular sequence ?
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2.2 years ago Sara • 0
0
votes
2
replies
772
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DESeq2: how could the lower mean abundance treatment show a positive and significant LFC?
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2.2 years ago Roey Angel • 0
0
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4
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Retrieve gene ontologies (GO) for genes and a species by REST API
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2.2 years ago Rockbar • 0
2
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0
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bioNeuro plot_expression_profile - how to order samples in plot output
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2.2 years ago Christopher ▴ 20
0
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0
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Dual species RNA-seq, Library size and normalization
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2.2 years ago Florian • 0
0
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0
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Pysam pileup and Rsamtools pileup output discrepancy
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2.2 years ago Xinqi • 0
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0
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Using DADA2 for finding viral sequence variants
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2.2 years ago Sara • 0
0
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0
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How many ancestries to send in admixMap() when doing a two-way analysis?
GENESIS admixMap
2.2 years ago mailtoshivam13 • 0
0
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0
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886
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clusterProfiler code to GO enrichment analysis seems to be incomplete
clusterProfiler DifferentialExpression
2.2 years ago nromerov • 0
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votes
1
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1.1k
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Subsetting cells from a single cell experiment
SingleCellExperiment
written 2.2 years ago by • 0
0
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0
replies
583
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loadstudy and cBioDataPack return error in vroom_
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2.2 years ago karam • 0
1,000 results • Page 9 of 20
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Answer: How does contrasts.fit do in limma to extract comparisons with a model having in by Gordon Smyth 53k
The limma Users Guide explains how to test for interactions or to test for contrasts very easily. limma can work with any design matrix, bu…
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You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
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In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
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Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
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BTW, I tested with no issue on MacOS ARM on our previous github issue.
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