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Install
•
reset
2
votes
4
replies
4.6k
views
BiocManager::install() does not work anymore
Install
PackageType
updated 4.0 years ago by
shepherl
4.2k • written 4.0 years ago by
Julie
• 0
0
votes
1
reply
1.7k
views
install GenomicFeatures fail
GenomicFeatures
install
updated 4.1 years ago by
James W. MacDonald
68k • written 4.1 years ago by
soda
▴ 80
0
votes
5
replies
2.0k
views
installation error: Error in setIs(class2, cli, extensionObject = obji, doComplete = FALSE and setClass() for chromVAR and VariantAnnotation
Install
VariantAnnotation
Bioconductor
chromVAR
updated 4.1 years ago by
Vincent J. Carey, Jr.
6.7k • written 4.1 years ago by
Hannah
• 0
1
vote
1
reply
1.6k
views
simplifyEnrichment install error
package
Rversion
Install
simplifyEnrichment
updated 4.5 years ago by
shepherl
4.2k • written 4.5 years ago by
ch_el
▴ 10
0
votes
2
replies
2.0k
views
Finding the correct version of DESeq2 for my version of R (3.6.1)
error
DESeq2
Install
updated 4.6 years ago by
James W. MacDonald
68k • written 4.6 years ago by
Mick
• 0
1
vote
4
replies
2.2k
views
Failing to install DEP package. Some strange error.
R
Bioconductor
Install
DEP
4.6 years ago
tpm
• 0
2
votes
1
reply
1.2k
views
Problem with pd.hta.2.0 package installation
Install
updated 4.6 years ago by
James W. MacDonald
68k • written 4.6 years ago by
croft.carys
• 0
0
votes
1
reply
1.1k
views
error during installation of 'DEseq2' package
DESeq2
Install
updated 4.6 years ago by
Hervé Pagès
16k • written 4.6 years ago by
su
• 0
0
votes
1
reply
2.9k
views
BiocManager::install("EnsDb.Hsapiens.v75") install fails with non-zero exit status
biocmanager
Install
updated 4.7 years ago by
James W. MacDonald
68k • written 4.7 years ago by
saadmurtazakhan
▴ 10
0
votes
4
replies
1.9k
views
GO.db package can't be installed
install
GO.db
updated 4.8 years ago by
Martin Morgan
25k • written 4.8 years ago by
Enrico
• 0
0
votes
1
reply
2.5k
views
Install using BiocManager::install() doesn't work in docker container
Bioconductor
docker
Install
updated 4.8 years ago by
Martin Morgan
25k • written 4.8 years ago by
Khai-Chuong
• 0
0
votes
2
replies
1.9k
views
Installation fails only in Linux... How to debug "ERROR: lazy loading failed for package XXX"?
BiocCheck
Install
martini
4.8 years ago
Hector
• 0
1
vote
1
reply
1.3k
views
Errors in installing RforProteomics package
error
RforProteomics
Install
updated 4.9 years ago by
Mike Smith
★ 6.6k • written 4.9 years ago by
Phoebe
• 0
1
vote
3
replies
9.3k
views
problem in installing Bio conductor package
bioconductorpackages
Install
updated 19 months ago by
Guru
• 0 • written 4.9 years ago by
k200987
• 0
4
votes
9
replies
2.8k
views
HELP! Troubleshooting Installing EBImage Package
Install
CAMERA
insta
PackageType
updated 4.9 years ago by
Andrzej Oleś
▴ 750 • written 4.9 years ago by
Christopher
• 0
7
votes
2
replies
6.4k
views
Help in installing certain pacakges
software error
install
updated 5.2 years ago by
Martin Morgan
25k • written 5.2 years ago by
lirongrossmann
▴ 50
4
votes
5
replies
2.2k
views
Installing DESeq2 fails ; R can't find basic commands like 'rm' and 'mv'
deseq2
install
software error
5.2 years ago
mja18
▴ 40
0
votes
4
replies
2.9k
views
Error: unexpected string constant in "suppressPackageStartupMessages(.getRequiredPackages(quietly = TRUE)), when installed the package "Mus.musculus"…
install
packages
Mus.musculus
updated 5.3 years ago by
Kevin Blighe
★ 4.0k • written 5.3 years ago by
443606623
• 0
1
vote
5
replies
4.5k
views
Can't Download DESeq2 Package (Ubuntu 20.04; R 4.0.1; BioConductor 3.11)
deseq2
install
r4.0
bioconductor3.11
ubuntu20.04
5.3 years ago
ruwaa.ibrahem
• 0
0
votes
2
replies
1.4k
views
Error when installing pcaExplorer
install
GenomeInfoDbData
updated 5.5 years ago by
James W. MacDonald
68k • written 5.5 years ago by
lina.bird
• 0
0
votes
6
replies
2.2k
views
Illumina Methylation Manifest Install
Install
biocinstaller
package installation
7.4 years ago
julieumn
• 0
6
votes
2
replies
2.2k
views
Is there a way to tell biocLite() to install a Bioconductor package only if it is not installed already?
bioclite
package installation
installation
install
updated 7.7 years ago by
Mike Smith
★ 6.6k • written 7.7 years ago by
cristian
▴ 10
2
votes
2
replies
2.2k
views
BiomaRT URLs down? 404 Not Found
biomart
bioconductor
support.bioconductor.org
biocinstaller
install
7.7 years ago
n.pantelireis16
• 0
0
votes
7
replies
3.7k
views
BiocInstaller wants version of R that is not available yet
bioconductor
error
biocinstaller
package installation
install
updated 9.0 years ago by
Martin Morgan
25k • written 9.0 years ago by
matt.s.leslie
• 0
0
votes
5
replies
4.5k
views
source(biocLite.R) leads to this error >>> Peer certificate cannot be authenticated with given CA certificates
biocinstaller
installation
install
source
conda
updated 9.2 years ago by
Martin Morgan
25k • written 9.2 years ago by
jol.espinoz
▴ 40
2
votes
6
replies
38k
views
Installing Bioclite.R Package
Bioclite
install
9.9 years ago
louiseapps2
• 0
0
votes
6
replies
3.1k
views
Problems installing BiocLite on Fedora 23, R 3.2.2
bioclite
gcc
install
fedora
updated 9.9 years ago by
Martin Morgan
25k • written 9.9 years ago by
Knut Hansen
▴ 20
1
vote
1
reply
3.0k
views
installing GO.db on windows 64x
go
install
updated 10.0 years ago by
James W. MacDonald
68k • written 10.0 years ago by
nikka1691
• 0
0
votes
1
reply
2.7k
views
"Error in readRDS" while trying to install XML package
xml
install
10.2 years ago
jason.harris
• 0
1
vote
1
reply
5.3k
views
Problems installing S4Vectors using Bioconductor version 3.0 (BiocInstaller 1.16.5), R version 3.2.1.
install
installation
biocinstaller
10.3 years ago
tresch
• 0
0
votes
5
replies
2.5k
views
Flowclust install probelms on Ubuntu
flowclust
ubuntu
install
error
10.4 years ago
gareth.howell
• 0
0
votes
1
reply
2.3k
views
Compilation problem installing IRanges
Iranges
install
updated 10.4 years ago by
Hervé Pagès
16k • written 10.4 years ago by
tuto345
• 0
0
votes
5
replies
2.5k
views
Error installing VariantAnnotation with bioconductor/devel_core
install
variantannotation
10.6 years ago
kforner
• 0
3
votes
2
replies
6.1k
views
problem installing "vsn" on debian... gcc: error: unrecognized command line option -fstack-protector-strong
install
vsn
gcc
debian
10.7 years ago
regcl
• 0
1
vote
2
replies
2.4k
views
Installation of "xps" on windows 7 : error message
xps
windows 7
Install
updated 11.0 years ago by
cstrato
★ 3.9k • written 11.0 years ago by
Alexandre Henriques
• 0
8
votes
7
replies
2.3k
views
RMySQL availiability with Bioconductor 3.0
Install
RMySQL
Windows
updated 11.1 years ago by
Martin Morgan
25k • written 11.1 years ago by
Panagiotis Moulos
▴ 30
3
votes
2
replies
7.1k
views
errors when installing cummeRbund package
Install
cummerbund
Rcurl
xml
updated 11.1 years ago by
Martin Morgan
25k • written 11.1 years ago by
dnajuice
▴ 20
87 results • Page
2 of 2
Recent ...
Replies
Comment: PCA subset of genes vs DE
by
Ben
• 0
PCA evaluates separation according to your input. The subset of genes you used may be entirely identical in terms of expression, indicatin…
Comment: Problem with MakeTxDbFromGFF
by
Ben
• 0
Wow can't believe he can really answer this [speed stars][1] [1]: https://speed-stars.co
Comment: Help with defining groups
by
Phinney, Brett
▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness
by
massimo
• 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package
by
ksankaran
• 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
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