Showing : cancer • reset
0
votes
0
replies
570
views
Job: Postdoctoral Fellow – Computational Biology (Genetic Interactions in Cancer)
geneticinteractions cancer networks machine_learning
14 months ago Colm • 0
0
votes
1
reply
534
views
BioC packages in cancer genomics
genomics cancer
updated 13 months ago by ★ 3.9k • written 14 months ago by ▴ 670
0
votes
0
replies
697
views
Job: PhD Positions in Computational Research, Data Science and Artificial Intelligence at the German Cancer Research Center (DKFZ)
cancer bioinformatics proteomics genomics phd
17 months ago DKFZ International PhD Program ▴ 10
1
vote
0
replies
749
views
Job: Research Fellow in Prostate Cancer Proteomics (Bioinformatics/Stats/Data Analysis) - University of St Andrews
Multiomics Proteomics Cancer Statistics Bioinformatics
21 months ago Andy Lynch ▴ 120
0
votes
0
replies
732
views
Calculating tumour purity having only CNA data
PureCN CNA purity cancer
22 months ago JAcky • 0
0
votes
0
replies
736
views
Job: Postdoc position - Genetic epi/statistical genetics
GWAS cancer biomarkers PRS
22 months ago Sarah • 0
1
vote
0
replies
733
views
Job: PhD Positions in Computational Research, Data Science and Artificial Intelligence at the German Cancer Research Center (DKFZ)
phd cancer genomics proteomics bioinformatics
2.0 years ago DKFZ International PhD Program ▴ 10
0
votes
1
reply
707
views
WGCNA
Cancer
updated 2.4 years ago by ▴ 780 • written 2.4 years ago by • 0
0
votes
0
replies
832
views
Job: Computational Biology Lab Head, Brain Cancer Centre, Melbourne, Australia
australia cancer wehi
3.0 years ago • updated 2.6 years ago Gordon Smyth 50k
0
votes
0
replies
849
views
Job: Cancer Bioinformatician @ University of East Anglia - Norwich Medical School, UK
cancer postdoc biomarkers Biobase
3.1 years ago Daniel Brewer ▴ 100
0
votes
0
replies
901
views
Job: Senior Research Associate in Bioinformatics @ University of East Anglia - Norwich Medical School, UK
Biobase bioinformatics biomarkers cancer
3.4 years ago Daniel Brewer ▴ 100
0
votes
0
replies
939
views
Job: Postdoctoral Data Scientist @ Oxford University, UK
Cancer CancerSubtypes postdoc
3.5 years ago Daniel Brewer ▴ 100
2
votes
13
replies
1.4k
views
Sample size imbalance in a multi-regional experiment
deseq2 cancer
updated 3.6 years ago by 41k • written 3.6 years ago by • 0
4
votes
7
replies
1.5k
views
Limma sample groups
microarray limma affy cancer
updated 3.6 years ago by 50k • written 3.6 years ago by • 0
0
votes
5
replies
2.0k
views
TCGA: to extract clinical data from barcode
cancer TCGAbiolinks
updated 3.6 years ago by ★ 3.9k • written 3.6 years ago by ▴ 10
1
vote
6
replies
2.1k
views
TCGA: clinical data and expression data
microarray annotation cancer
updated 14 months ago by • 0 • written 3.6 years ago by • 0
0
votes
5
replies
1.9k
views
Differential expression analysis of multiple RNA-seq datasets using DESeq2
deseq2 cancer
updated 3.6 years ago by 41k • written 3.6 years ago by • 0
4
votes
10
replies
2.5k
views
how to analyze WGCNA results?
cancer probe deseq2 annotation normalization
updated 3.9 years ago by ★ 3.9k • written 3.9 years ago by ▴ 10
0
votes
3
replies
1.3k
views
Topgo, Deseq and KEGG pathway
annotation cancer
updated 4.0 years ago by 3.8k • written 4.0 years ago by • 0
1
vote
2
replies
3.8k
views
Partial NA coefficients for 10 probe(s) Limma
limma microarray cancer
updated 4.0 years ago by ★ 3.9k • written 4.1 years ago by • 0
0
votes
1
reply
996
views
WGCNA analysis on RNAseq and proteoimcs data
cancer
updated 4.1 years ago by ★ 3.0k • written 4.1 years ago by • 0
0
votes
0
replies
860
views
Job: Data Sciences Statistician - Dana-Farber Cancer Institute
job data science biostatistics bioinformatics cancer Job
4.2 years ago Patrick Kimes ▴ 10
0
votes
0
replies
977
views
Job: Computational Biology & Bioinformatics Postdoctoral Research Associate / Research Assistant (Fixed Term) in (Epi)Genomic Regulation of Cancer @ Unive…
cancer computational biology bioinformatics epigenetics Job
4.2 years ago Shamith.Samarajiwa ▴ 180
0
votes
0
replies
813
views
Job: Senior Postdoc/Bioinformatician Research Fellow @ UEA, Norwich, UK - New deadline
cancer nextgenerationsequencing prostate Job
4.2 years ago • updated 3.8 years ago Daniel Brewer ▴ 100
0
votes
0
replies
671
views
Methylmix results are a bit different from beta values results
cancer methylmix methylation betavalues DMvalues
4.3 years ago luciomora8 • 0
0
votes
0
replies
834
views
Job: Part-time postdoc in Bioinformatics (0.5 FTE) @ UEA, Norwich, UK
cancer biomarkers bioinformatician Job
4.4 years ago Daniel Brewer ▴ 100
0
votes
0
replies
937
views
Job: postdoc position in computational cancer biology in Milan, Italy
cancer networks genomics epigenomics Job
4.4 years ago • updated 4.3 years ago marschaefer • 0
2
votes
3
replies
1.2k
views
DESeq2: DE Analysis with very imbalanced samples per condition
deseq2 cancer
updated 3 months ago by • 0 • written 4.4 years ago by • 0
0
votes
0
replies
565
views
miRNA and drugs
cancer
4.5 years ago maria.k.pagoni • 0
0
votes
0
replies
863
views
Job: Bolzano, Italy: Post Doc Researcher in bioinformatics of cancer epigenomics
cancer Job
4.5 years ago Johannes Rainer ★ 2.0k
1
vote
4
replies
1.2k
views
Identify recurrent isoform switches using IsoformSwitchAnalyzeR in multiple rectal tumor samples
cancer Isoform limma IsoformSwitchAnalyzeR
updated 4.5 years ago by ▴ 120 • written 4.6 years ago by • 0
1
vote
0
replies
1.0k
views
Job: PhD Studentship in Computational Biology and Machine Learning @ University of Cambridge (application deadline November 15th 2019)
cancer genomics deep learning computational biology Job
4.6 years ago • updated 4.5 years ago Shamith.Samarajiwa ▴ 180
2
votes
1
reply
2.3k
views
How to perform a differential expression analysis from TCGA file EBPlusPlusAdjustPANCAN_IlluminaHiSeq_RNASeqV2.geneExp.tsv
cancer limma deseq2
updated 4.6 years ago by ▴ 830 • written 4.6 years ago by ▴ 20
0
votes
0
replies
760
views
Job: Bioinformatician @ University of Cambridge
cancer bioinformatics R Job
4.6 years ago Shamith.Samarajiwa ▴ 180
0
votes
0
replies
905
views
Output GenVisR mutation frequency data by gene name instead of by sample name
GenVisR mutation frequency R cancer bioconductor
4.6 years ago sheneicechang • 0
0
votes
0
replies
686
views
News: Bay area Biotech-Pharma Statistics Workshop, with free R user meetup (Nov 6-8)
cancer meetup News
4.6 years ago Ning Leng • 0
1
vote
0
replies
980
views
Job: Research Assistant/Research Associate in Machine Learning and Computational Biology (fixed-term - closing date is Sunday 20th October 2019) @ Univers…
deep-learning cancer immunotherapy computational biology Job
4.6 years ago • updated 4.5 years ago Shamith.Samarajiwa ▴ 180
0
votes
5
replies
1.8k
views
RNA-seq time course analysis with only one experimental condition
deseq2 cancer rna-seq time-series
4.8 years ago mah19 • 0
0
votes
0
replies
811
views
MatchGenes in Bumphunter - result list with multiple genes
cancer
4.8 years ago hanna_engqvist • 0
0
votes
0
replies
846
views
Job: Post-doctoral Fellow - Aparicio Lab @ BC Cancer Research Center, Vancouver BC Canada
single cell genome cancer Job
4.9 years ago jmaanaki • 0
0
votes
2
replies
888
views
Chromosomal location mapping for miRNAs
cancer
updated 4.9 years ago by 65k • written 4.9 years ago by ▴ 10
0
votes
3
replies
963
views
Is Background Correction necessary before DESeq analysis
deseq2 cancer
updated 4.9 years ago by 41k • written 4.9 years ago by • 0
1
vote
4
replies
965
views
DESeq2:Why is there an oblique line in my MA picture, which happened before, what caused this?
deseq2 cancer
updated 4.9 years ago by 41k • written 4.9 years ago by • 0
4
votes
1
reply
8.5k
views
WGCNA-unable to install GO.db package
go cancer
updated 5.0 years ago by 25k • written 5.0 years ago by ▴ 20
1
vote
0
replies
1.5k
views
Job: Research Assistant position (Fixed Term -12 months initially - application deadline 9th June) in Machine Learning & Computational Cancer Genomics @ …
cancer deep learning genomics Job
5.0 years ago • updated 4.9 years ago Shamith.Samarajiwa ▴ 180
0
votes
1
reply
739
views
Help installing netReg
netReg cancer
5.0 years ago sbrackett007 • 0
2
votes
4
replies
1.2k
views
SCAN.UPC : lost too many samples from GSE (BrainArray + ConvThreshold)
SCAN.UPC probe normalization GEOdata cancer
5.1 years ago s.goncalvesclaro ▴ 10
0
votes
0
replies
846
views
Job: Summer Studentships in Data Science & Computational Biology (2019) at the University of Cambridge
R Python Computational-Biology Cancer Job
5.1 years ago Shamith.Samarajiwa ▴ 180
0
votes
0
replies
1.0k
views
Job: Research Fellow, Computational Multi-Omics of Cancer (University College London)
cancer multi-omics genomic instability machine learning data integration Job
5.1 years ago msecrier ▴ 20
6
votes
7
replies
1.3k
views
Appropriate experimental design for differential expresion
edgeR normalization cancer
updated 5.1 years ago by ★ 1.3k • written 5.1 years ago by ▴ 30
50 results • Page 1 of 1
Recent ...
Replies
Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 30
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Awards • All
Popular Question to Leo Lahti ▴ 30
Scholar to James W. MacDonald 65k
Popular Question to shepherl 3.8k
Scholar to Michael Love 41k
Supporter to JKim • 0
Locations • All
France, 12 minutes ago
Melbourne, Australia, 26 minutes ago
INDIA, 58 minutes ago
WEHI, Melbourne, Australia, 1 hour ago
Finland, 2 hours ago
Traffic: 670 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6