0
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7
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690
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News: List of Deprecated Packages for Bioc3.19
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9 weeks ago • updated 10 days ago shepherl 3.9k
1
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1
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105
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Cannabis OrgDb
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updated 10 days ago by 65k • written 10 days ago by ▴ 10
0
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8
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327
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updated 8 days ago by ★ 1.3k • written 10 days ago by • 0
0
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0
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67
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10 days ago info ▴ 10
1
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4
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195
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minfi::read.metharray.exp
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updated 9 days ago by ▴ 780 • written 11 days ago by • 0
0
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2
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238
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featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_get_next_read_BIN: Assertion `l_name < 256' failed. Aborted (core dumpe…
metaMSdata
10 days ago • updated 8 days ago shuwangxinze1996 • 0
1
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2
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985
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DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, parametric = FALSE, : NA/NaN/Inf in foreign function call (arg 1)"
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updated 10 days ago by ▴ 170 • written 14 months ago by ▴ 10
0
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2
replies
150
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limma-voom: Calculate the log-fold change in gene expression within a sample
limma RNASeq voom
written 10 days ago by • 0
3
votes
3
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214
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DESeq2 - dispersion estimation when there is none
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updated 10 days ago by 41k • written 11 days ago by • 0
1
vote
4
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220
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Error EPICv2 ChAMP
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updated 11 days ago by 65k • written 15 days ago by • 0
0
votes
1
reply
120
views
FDR via q-value
qvalue
updated 11 days ago by 65k • written 14 days ago by • 0
0
votes
5
replies
286
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Error for AnnotationForge makeOrgPackageFromNCBI function
OrgDb AnnotationForge
updated 9 days ago by 65k • written 11 days ago by • 0
0
votes
2
replies
200
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RNAseq:Technical replicates from different batches
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14 days ago • updated 11 days ago catv • 0
0
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3
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1.2k
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updated 11 days ago by • 0 • written 18 months ago by ▴ 70
6
votes
12
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4.8k
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BiocFileCache/ExperimentHub/AnnotationHub temporary ERROR
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6 months ago • updated 11 days ago shepherl 3.9k
1
vote
13
replies
376
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Trying to use enrichGO
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12 days ago • updated 8 days ago fernanda.backsouza ▴ 10
0
votes
0
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77
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Unlocking Potential: NURS FPX Strategies and Insights
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12 days ago vaxahey107 • 0
14
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17
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1.1k
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Why p value inconsistent when using different number of pathway score?
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13 days ago • updated 1 day ago Chris • 0
0
votes
0
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92
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I am trying to detect alternative splicing.
ASpli
13 days ago Sebashish • 0
3
votes
2
replies
206
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Cannabis and KEGGgraph
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updated 11 days ago by ★ 3.9k • written 13 days ago by ▴ 10
0
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3
replies
145
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Error retrieving ensembl gene id using biomaRt...
biomaRt
updated 14 days ago by 65k • written 14 days ago by ▴ 30
2
votes
2
replies
182
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OrgDb for maize
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updated 14 days ago by 65k • written 14 days ago by • 0
1
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0
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272
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Tutorial: Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
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14 days ago BioinfGuru ▴ 30
4
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6
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409
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FilterByExpr low counts with small sample size
edgeR
16 days ago • updated 11 days ago Jonathan ▴ 10
0
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2
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127
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14 days ago prity6459 • 0
0
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3
replies
178
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Finding DEGs by using edgeR
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updated 14 days ago by 50k • written 15 days ago by • 0
3
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1
reply
165
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Log-cpm values from limma
limma edgeR RNASeq
updated 14 days ago by 50k • written 15 days ago by • 0
0
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4
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190
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FGSEA pre-ranked input in increasing order or decreasing
fgsea
14 days ago sropri • 0
0
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3
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157
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Different number of exons in reference genome affects DEXSeq analysis
DEXSeq
updated 3 days ago by ★ 1.9k • written 15 days ago by • 0
0
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1
reply
149
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Adding columns to DEXSeqResults object
DEXSeq
updated 15 days ago by ★ 1.9k • written 16 days ago by • 0
0
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0
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115
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Warning while loading DEP package
DEP
updated 15 days ago by 3.9k • written 15 days ago by • 0
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130
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rlog transformation
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updated 15 days ago by 41k • written 15 days ago by • 0
0
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reply
106
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updated 15 days ago by 41k • written 15 days ago by • 0
1
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2
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697
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DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
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16 days ago • updated 7 days ago ussarizona ▴ 10
0
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1
reply
129
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covariate with negative and positive values
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updated 15 days ago by 41k • written 16 days ago by • 0
0
votes
1
reply
140
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DESEQ2 output gives multiple groups when only 2 groups are present
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updated 15 days ago by ★ 4.1k • written 16 days ago by • 0
1
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2
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209
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significant difference of p-values with dream() after updating VariancePartition
variancePartition
15 days ago • updated 14 days ago Le • 0
1
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2
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151
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Error in champ.load(): The following specified files do not exist
ChAMP
15 days ago Sherin • 0
0
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1
reply
98
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Input Question for deseq.r
RSeqAn
updated 15 days ago by ★ 4.1k • written 15 days ago by • 0
0
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4
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232
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Differential peaks that were not identified in diffbind were identified in diseq2
DiffBind DESeq2 ATACSeq
16 days ago • updated 13 days ago lonn • 0
0
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7
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299
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Methylation Analysis experiment design using Limma
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16 days ago • updated 10 days ago hortense96 • 0
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0
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16 days ago creativepeptides2018 • 0
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Syntaxerror IsoCorrectoR
16 days ago Maliha Tabassum • 0
0
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4
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18
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News: List of Deprecated Packages for Bioc3.18
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136
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SNP locus package for mouse?
SNPlocs packFinder
updated 17 days ago by 65k • written 19 days ago by • 0
1
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2
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geneList error in clusterprofiler
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17 days ago Ana • 0
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5
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1.7k
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