Showing : software error • reset
2
votes
20
replies
2.7k
views
plotPCA in DESeq2
software error deseq2
3.9 years ago yueli7 ▴ 20
4
votes
17
replies
5.4k
views
Upgrade to 3.1 error
software error
updated 8.8 years ago by ▴ 670 • written 9.0 years ago by ▴ 10
1
vote
16
replies
3.6k
views
Error: could not find function "dba"
software error diffbind dba
7.5 years ago mmarins • 0
7
votes
14
replies
3.6k
views
Issue setting up BiocManager due to mgcv / clang?
software error
updated 5.1 years ago by 25k • written 5.1 years ago by • 0
0
votes
14
replies
1.7k
views
Error while opening Mart with biomaRt package
software error ensembl biomart
4.4 years ago loicborcard01 • 0
1
vote
13
replies
5.6k
views
ERROR: dependency 'GO.db' is not available for package 'systemPipeR'
software error
7.8 years ago phpaul2010 • 0
1
vote
12
replies
1.4k
views
negative one "-1" values in index files using Rsubread
software error rsubread
updated 4.1 years ago by ▴ 380 • written 4.1 years ago by • 0
6
votes
12
replies
1.8k
views
CRISPRseek ERROR, can't read featureWeightMatrix in, wrong data format
CRISPRseek software error
4.5 years ago nils.hassel • 0
2
votes
12
replies
2.3k
views
Synapter - makeMaster() and synergise() functions warnings/fails
software error warnings synapter
9.4 years ago sogueta • 0
1
vote
12
replies
3.2k
views
Rcytoscape Rstudio Error in xml.rpc(obj@uri, "Cytoscape.version") : Problems
software error rcytoscape xml
updated 9.5 years ago by • 0 • written 9.5 years ago by ▴ 120
1
vote
12
replies
5.5k
views
Install rtracklayer with the Error undefined symbol: OPENSSL_init_ssl (system Centos7.3 R3.5.1 openssl-1.1.1)
software error rtracklayer bioconductor openssl
5.4 years ago ruan_wei_dong • 0
3
votes
12
replies
2.5k
views
DESeq2 Installation Errors
deseq2 software error
updated 20 months ago by • 0 • written 3.6 years ago by • 0
7
votes
12
replies
1.9k
views
readGAlignmentPairs fail to read paired end data
software error
updated 4.8 years ago by 25k • written 4.8 years ago by ▴ 90
1
vote
11
replies
6.9k
views
Unable to install packages
software error deseq2
updated 5.0 years ago by • 0 • written 5.0 years ago by ▴ 10
5
votes
11
replies
1.6k
views
Rsubread: change in behavior when accepting mixed paired end and single end files
software error Rsubread
updated 3.9 years ago by 50k • written 3.9 years ago by • 0
5
votes
11
replies
2.6k
views
Certificate problem with ExperimentHub / AnnotationHub
software error curatedmetagenomicdata annotationhub experimenthub
updated 7.4 years ago by ★ 1.1k • written 7.4 years ago by ▴ 10
6
votes
11
replies
3.7k
views
arrayQualityMetrics: "All SVG style attribute must have length 1" and other errors
arrayqualitymetrics svg software error
updated 7.9 years ago by ▴ 40 • written 9.4 years ago by ▴ 200
0
votes
11
replies
4.3k
views
Examples from keggList in KEGGREST don't all work
software error keggrest
8.2 years ago Bryan Hanson • 0
0
votes
11
replies
2.6k
views
package 'ChAMP' demo/test code fails at champ.CNA()
software error
updated 7.3 years ago by ▴ 90 • written 9.3 years ago by ▴ 90
2
votes
11
replies
1.9k
views
failure importing data with tximport with error information
software error tximport hdf5
updated 4.5 years ago by 41k • written 4.5 years ago by ▴ 10
4
votes
10
replies
1.6k
views
DESeq2 interacting with agricolae
deseq2 software error
updated 7.7 years ago by ★ 13k • written 7.7 years ago by • 0
0
votes
10
replies
2.2k
views
tximport Error in attr(x, "names") <- as.character(value) : 'names' attribute [2] must be the same length as the vector [1]
software error RNAseq tximport R
updated 4.7 years ago by 41k • written 4.7 years ago by • 0
2
votes
10
replies
2.2k
views
Trouble Installing lifOver workflow
software error liftOver workflowinstall package installation
updated 7.6 years ago by 65k • written 7.6 years ago by • 0
0
votes
9
replies
1.7k
views
i can't install metade package
software error
updated 4.0 years ago by ★ 3.9k • written 4.0 years ago by • 0
2
votes
9
replies
2.1k
views
i can't find cummeRbund package
software error cuumeRbund rna-seq
updated 8.7 years ago by 25k • written 8.7 years ago by ▴ 40
1
vote
9
replies
1.6k
views
IONiseR error when using the readFast5Summary function on nanopore data
ioniser software error bioconductor
7.5 years ago mv340788 • 0
10
votes
9
replies
6.5k
views
CAMERA error: $ operator not defined for this S4 class
software error CAMERA
updated 8.8 years ago by ▴ 20 • written 8.8 years ago by ▴ 60
1
vote
9
replies
744
views
hypergraph package - kcores error
software error hypergraph
updated 4.4 years ago by 65k • written 4.5 years ago by • 0
1
vote
9
replies
1.8k
views
Help running the nondetects::qpcrImpute on my data?
nondetects software error
updated 6.2 years ago by • 0 • written 6.3 years ago by ★ 7.9k
2
votes
9
replies
2.0k
views
BiocParallel not proceeding
software error
updated 7.5 years ago by 25k • written 7.5 years ago by ▴ 70
1
vote
9
replies
3.1k
views
Problem with ggcyto/flowWorkspace from GitHub
software error flowworkspace opencyto
8.3 years ago anders.tondell ▴ 30
3
votes
9
replies
4.7k
views
topGO "invalid argument to unary operator"
software error topgo
updated 5.5 years ago by 65k • written 5.5 years ago by • 0
1
vote
8
replies
3.0k
views
GenomicFeatures package ERROR
software error genomicfeatures
updated 6.9 years ago by ★ 11k • written 8.4 years ago by • 0
2
votes
8
replies
2.2k
views
error in getBM (biomaRt): "error: no such table: metadata"
biomaRt software error
updated 2.8 years ago by ★ 6.5k • written 3.9 years ago by • 0
4
votes
8
replies
2.1k
views
Don't let TopGo to trimm long GO names
go software error topgo rna-seq
updated 15 months ago by 65k • written 3.9 years ago by ▴ 30
3
votes
8
replies
10k
views
RDAVIDWebService - Unable to sendViaPost to url etc etc - server time out
software error david rdavidwebservice
updated 8.7 years ago by • 0 • written 9.1 years ago by ▴ 200
2
votes
8
replies
1.6k
views
gene enrichment using enrichGO function throuth annotationHub orgDb
software error enrichGO annotationHub clusterProfiler Job
updated 4.0 years ago by 65k • written 4.0 years ago by • 0
1
vote
8
replies
1.9k
views
SummarizedExperiment Error! expressionSet data structure
software error summarizedexperiment
updated 8.1 years ago by 25k • written 8.1 years ago by ▴ 20
0
votes
8
replies
1.5k
views
Error in running development version of PureCN
PureCN software error
7.6 years ago • updated 7.5 years ago hustlxc • 0
1
vote
8
replies
2.4k
views
Database download ends with error for AnnotationHub
software error
9.0 years ago Arman Shahrisa ▴ 20
7
votes
8
replies
2.6k
views
Very small bug in DESeq2
software error
7.6 years ago arfranco ▴ 130
0
votes
8
replies
3.7k
views
The common error with ballgown has not been solved!
ballgown software error
updated 7.2 years ago by ▴ 650 • written 7.2 years ago by ▴ 10
2
votes
8
replies
2.0k
views
CAGEr BAM files size issue
CAGEr BAM software error R biostrings
updated 6.7 years ago by ▴ 180 • written 6.8 years ago by ▴ 10
0
votes
8
replies
1.9k
views
Bioconductor SVN server error
software error github
7.7 years ago emathe • 0
6
votes
8
replies
7.8k
views
Problem installing BiocGenerics
software error BioGenerics bioclite
6.5 years ago p.janitza ▴ 50
0
votes
8
replies
2.3k
views
Combat in gene pattern error annotation
software error ComBat Gene Pattern
updated 6.4 years ago by • 0 • written 8.7 years ago by • 0
3
votes
8
replies
1.3k
views
please someone help me to run this code
software error R
8.3 years ago Angel ▴ 40
0
votes
8
replies
2.2k
views
How to use the QUIDE-seq R/python package to remove non-genomic DNA sequences?
annotation software software error
updated 7.9 years ago by ★ 4.3k • written 7.9 years ago by ▴ 10
1
vote
8
replies
1.6k
views
How to read variants into R from large dataset using VariantAnnotation
software error
updated 5.2 years ago by 25k • written 5.2 years ago by • 0
0
votes
8
replies
1.1k
views
Failed to read SDRF
software error arrayexpressHTS
4.2 years ago Ed Siefker ▴ 230
50 results • Page 1 of 1
Recent ...
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Comment: log2FoldChange value is way too different when compared with counts(dds) by HAK • 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call by ATpoint ★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Comment: Store output of matchPWM() by James W. MacDonald 65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
Comment: DEseq2 coefficient by JKim • 0
Hi Dr. Love, I'm sorry to ask another question to my old post. If the design isn't balanced, the interpretation of coefficients will be…
Comment: Store output of matchPWM() by mat149 ▴ 70
out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) Error in do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) : '…
Votes
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
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Scholar to James W. MacDonald 65k
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