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9.7 years ago ribioinfo ▴ 100
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Help in interpreting the plot of the function plotRLDF in limma package for microarray dataset concerning two categorical classes
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9.7 years ago svlachavas ▴ 840
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updated 9.7 years ago by 43k • written 9.7 years ago by ▴ 10
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DESeq2 multifactor and paired sample analysis
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9.7 years ago amy • 0
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inconsistent results from applyPileups and pileLettersAt
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limma paired design with continous covariate
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Use matchPattern for large DNAStrings
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should I use rsem's summary to genes or tximport's?
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updated 9.7 years ago by 43k • written 9.7 years ago by ▴ 10
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I am getting a champ error during BatchNorm
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9.7 years ago brenna.hott • 0
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modified the header data in the fixed slots of a VCFHeader object
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updated 9.7 years ago by ★ 11k • written 9.7 years ago by • 0
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DEGs : finding DE genes specific for one condition
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9.7 years ago alva.james • 0
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ggbio plotIdeogram(..., zoom.region) broken ?
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9.7 years ago kevin.rue ▴ 350
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Run DESeq with only a handful of genes
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9.7 years ago xinlian.zhang25 • 0
0
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Questions about the correct implementation of the function plotRLDF from R package limma regarding classification of a microarray dataset
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9.7 years ago svlachavas ▴ 840
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Bioc 3.3 Windows 10 eiR package fails to install
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parRapply in BiocParallel ?
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updated 9.7 years ago by ▴ 30 • written 9.7 years ago by ▴ 40
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updated 9.7 years ago by 68k • written 9.7 years ago by • 0
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Annotation in ExpressionSet object
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9.7 years ago NS ▴ 60
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9.7 years ago amias ▴ 10
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about paired-samples in edgeR
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9.7 years ago Bogdan ▴ 670
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updated 9.7 years ago by 43k • written 9.7 years ago by • 0
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9.7 years ago Tom ▴ 10
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9.7 years ago t.kuilman ▴ 170
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How to calculate risk of relapse based on subtypes and proliferation (ROR-P) PAM50 sub-typing?
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9.7 years ago g_draculla ▴ 10
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Trouble with Custom PC Plot
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9.7 years ago newsomew13 • 0
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question for SVA package
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updated 9.7 years ago by ▴ 650 • written 9.7 years ago by • 0
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updated 9.7 years ago by 16k • written 9.7 years ago by ▴ 40
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Null model in SVA for patient paired test comparing tumor vs normal
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updated 9.7 years ago by 4.3k • written 9.7 years ago by • 0
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Are these contrasts correct for use in DESeq2?
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updated 9.7 years ago by 43k • written 9.7 years ago by ▴ 90
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Gviz: How to plot UTRs with GRanges object?
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