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install
•
reset
2
votes
6
replies
36k
views
Installing Bioclite.R Package
Bioclite
install
8.4 years ago
louiseapps2
• 0
3
votes
5
replies
10k
views
installing synapter package: package is not available for Bioconductor version '3.14'
synapter
Install
2.2 years ago
czan
▴ 10
5
votes
18
replies
7.5k
views
Install DESeq2 problem for macbook pro M1 Max
Bioconductor
Install
DESeq2
updated 4 months ago by
picasa1983
• 0 • written 2.3 years ago by
Victor
• 0
3
votes
2
replies
6.7k
views
errors when installing cummeRbund package
Install
cummerbund
Rcurl
xml
updated 9.6 years ago by
Martin Morgan
25k • written 9.6 years ago by
dnajuice
▴ 20
1
vote
3
replies
6.6k
views
problem in installing Bio conductor package
bioconductorpackages
Install
updated 10 weeks ago by
Guru
• 0 • written 3.5 years ago by
k200987
• 0
1
vote
4
replies
6.1k
views
Error loading impute(): '/usr/lib/libgfortran.5.dylib' (no such file)
Install
impute
updated 12 months ago by
yuzhijian
• 0 • written 2.3 years ago by
Aaron
• 0
3
votes
2
replies
5.6k
views
problem installing "vsn" on debian... gcc: error: unrecognized command line option -fstack-protector-strong
install
vsn
gcc
debian
9.2 years ago
regcl
• 0
1
vote
3
replies
5.4k
views
Not able to install packages in Bioconductor version '3.16'
Install
BiocManager
version3.16
updated 16 months ago by
shepherl
3.9k • written 17 months ago by
Tonmoya
• 0
1
vote
1
reply
5.0k
views
Problems installing S4Vectors using Bioconductor version 3.0 (BiocInstaller 1.16.5), R version 3.2.1.
install
installation
biocinstaller
8.8 years ago
tresch
• 0
7
votes
2
replies
4.5k
views
Help in installing certain pacakges
software error
install
updated 3.8 years ago by
Martin Morgan
25k • written 3.8 years ago by
lirongrossmann
▴ 40
4
votes
2
replies
4.1k
views
Install package without updating dependent package
Install
AnnotationForge
2.4 years ago
亮
• 0
0
votes
5
replies
3.8k
views
source(biocLite.R) leads to this error >>> Peer certificate cannot be authenticated with given CA certificates
biocinstaller
installation
install
source
conda
updated 7.7 years ago by
Martin Morgan
25k • written 7.7 years ago by
jol.espinoz
▴ 40
2
votes
1
reply
3.8k
views
Bioconductor Package Installation
install
TxDb.Hsapiens.UCSC.hg38.knownGene
2.2 years ago
Theresa
▴ 20
1
vote
5
replies
3.6k
views
Can't Download DESeq2 Package (Ubuntu 20.04; R 4.0.1; BioConductor 3.11)
deseq2
install
r4.0
bioconductor3.11
ubuntu20.04
3.9 years ago
ruwaa.ibrahem
• 0
1
vote
20
replies
3.6k
views
Deseq2 installed, but there is no package called ‘Biostrings’
DESeq2
Install
updated 19 months ago by
James W. MacDonald
65k • written 19 months ago by
Hannah000111
• 0
0
votes
1
reply
3.4k
views
package ‘Bioconductor’ is not available for Bioconductor version '3.16'
Bioconductor
Install
updated 12 months ago by
ATpoint
★ 4.1k • written 12 months ago by
3305504122
• 0
0
votes
7
replies
3.0k
views
BiocInstaller wants version of R that is not available yet
bioconductor
error
biocinstaller
package installation
install
updated 7.5 years ago by
Martin Morgan
25k • written 7.5 years ago by
matt.s.leslie
• 0
5
votes
4
replies
2.7k
views
XVector installation fails because zlib.h is not found
XVector
docker
Install
2.5 years ago
RobKo
▴ 10
0
votes
2
replies
2.7k
views
non-zero exit status when trying to install a package
Install
2.0 years ago
BioC123
• 0
1
vote
1
reply
2.7k
views
installing GO.db on windows 64x
go
install
updated 8.6 years ago by
James W. MacDonald
65k • written 8.6 years ago by
nikka1691
• 0
2
votes
4
replies
2.7k
views
BiocManager::install() does not work anymore
Install
PackageType
updated 2.6 years ago by
shepherl
3.9k • written 2.6 years ago by
Julie
• 0
0
votes
6
replies
2.6k
views
Problems installing BiocLite on Fedora 23, R 3.2.2
bioclite
gcc
install
fedora
updated 8.5 years ago by
Martin Morgan
25k • written 8.5 years ago by
Knut Hansen
▴ 20
0
votes
1
reply
2.3k
views
"Error in readRDS" while trying to install XML package
xml
install
8.8 years ago
jason.harris
• 0
0
votes
4
replies
2.2k
views
Error: unexpected string constant in "suppressPackageStartupMessages(.getRequiredPackages(quietly = TRUE)), when installed the package "Mus.musculus"…
install
packages
Mus.musculus
updated 3.9 years ago by
Kevin Blighe
★ 3.9k • written 3.9 years ago by
443606623
• 0
0
votes
6
replies
2.1k
views
Error when Installing BioConductor Package ('affy')
Bioconductor
Install
affy
updated 5 months ago by
ATpoint
★ 4.1k • written 17 months ago by
laujihen
• 0
2
votes
4
replies
2.1k
views
question regarding installation of "enrichplot" with BiocManager
R
BiocManager
install
clusterProfiler
GO
written 17 months ago by
abhisek001
• 0
0
votes
1
reply
2.1k
views
BiocManager::install("EnsDb.Hsapiens.v75") install fails with non-zero exit status
biocmanager
Install
updated 3.3 years ago by
James W. MacDonald
65k • written 3.3 years ago by
saadmurtazakhan
▴ 10
0
votes
1
reply
2.1k
views
Compilation problem installing IRanges
Iranges
install
updated 9.0 years ago by
Hervé Pagès
16k • written 9.0 years ago by
tuto345
• 0
1
vote
1
reply
2.1k
views
packages not installing from sources the package which needs compilation
Install
updated 16 months ago by
James W. MacDonald
65k • written 16 months ago by
무선
• 0
0
votes
5
replies
2.1k
views
Error installing VariantAnnotation with bioconductor/devel_core
install
variantannotation
9.2 years ago
kforner
• 0
1
vote
2
replies
2.1k
views
Installation of "xps" on windows 7 : error message
xps
windows 7
Install
updated 9.6 years ago by
cstrato
★ 3.9k • written 9.6 years ago by
Alexandre Henriques
• 0
0
votes
5
replies
2.0k
views
Flowclust install probelms on Ubuntu
flowclust
ubuntu
install
error
9.0 years ago
gareth.howell
• 0
0
votes
2
replies
1.9k
views
AnnotationHub installation ‘Rcpp’ 1.0.6 is already loaded, but >= 1.0.7 is required
AnnotationHub
Install
updated 2.1 years ago by
shepherl
3.9k • written 2.1 years ago by
nhaus
▴ 30
0
votes
3
replies
1.9k
views
gpart installation fails: gpart_cpp.cpp:622:42: error: ‘PI’ was not declared in this scope
install
gpart
renv
updated 2.2 years ago by
Bert
• 0 • written 2.3 years ago by
matt.shenton
• 0
0
votes
1
reply
1.8k
views
Install using BiocManager::install() doesn't work in docker container
Bioconductor
docker
Install
updated 3.4 years ago by
Martin Morgan
25k • written 3.4 years ago by
Khai-Chuong
• 0
4
votes
9
replies
1.8k
views
HELP! Troubleshooting Installing EBImage Package
Install
CAMERA
insta
PackageType
updated 3.5 years ago by
Andrzej Oleś
▴ 750 • written 3.5 years ago by
Christopher
• 0
8
votes
7
replies
1.8k
views
RMySQL availiability with Bioconductor 3.0
Install
RMySQL
Windows
updated 9.6 years ago by
Martin Morgan
25k • written 9.6 years ago by
Panagiotis Moulos
▴ 30
0
votes
3
replies
1.7k
views
Bioconductor 3.13 installer reports that affyQCReport is not available
Install
3.13
affyQCReport
updated 2.5 years ago by
Miguel
▴ 10 • written 2.6 years ago by
lsmatott
• 0
6
votes
2
replies
1.7k
views
Is there a way to tell biocLite() to install a Bioconductor package only if it is not installed already?
bioclite
package installation
installation
install
updated 6.2 years ago by
Mike Smith
★ 6.5k • written 6.2 years ago by
cristian
▴ 10
0
votes
6
replies
1.7k
views
Illumina Methylation Manifest Install
Install
biocinstaller
package installation
6.0 years ago
julieumn
• 0
0
votes
2
replies
1.6k
views
Cannot install bioconductor DESeq2 package on M1 mac ... any advice?
DESeq2
Install
r
updated 18 months ago by
ATpoint
★ 4.1k • written 18 months ago by
Catherine
• 0
0
votes
7
replies
1.6k
views
Unable to install RefPlus - R=4.3.1, BiocManager=3.18
Install
instal
updated 6 months ago by
James W. MacDonald
65k • written 6 months ago by
client.kashi
• 0
1
vote
4
replies
1.6k
views
Failing to install DEP package. Some strange error.
R
Bioconductor
Install
DEP
3.2 years ago
tpm
• 0
0
votes
2
replies
1.5k
views
Installation fails only in Linux... How to debug "ERROR: lazy loading failed for package XXX"?
BiocCheck
Install
martini
3.4 years ago
Hector
• 0
1
vote
7
replies
1.4k
views
query regarding error in installation of "goseq" R bioconductor package
R
Bioconductor
Install
updated 17 months ago by
shepherl
3.9k • written 17 months ago by
abhisek001
• 0
4
votes
5
replies
1.4k
views
Installing DESeq2 fails ; R can't find basic commands like 'rm' and 'mv'
deseq2
install
software error
3.8 years ago
mja18
▴ 40
0
votes
2
replies
1.4k
views
Installing DESEq2 Error: unable to access index for repository https://bioconductor.org
Install
Bioconductor
DESeq2
2.6 years ago
ladypurrsia
▴ 10
2
votes
2
replies
1.4k
views
BiomaRT URLs down? 404 Not Found
biomart
bioconductor
support.bioconductor.org
biocinstaller
install
6.3 years ago
n.pantelireis16
• 0
0
votes
4
replies
1.3k
views
GO.db package can't be installed
install
GO.db
updated 3.4 years ago by
Martin Morgan
25k • written 3.4 years ago by
Enrico
• 0
0
votes
2
replies
1.3k
views
Installation problems
Install
updated 2.0 years ago by
shepherl
3.9k • written 2.0 years ago by
laiajulianamu
• 0
50 results • Page
1 of 1
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Answer: normalization using Deseq2
by
ATpoint
★ 4.1k
counts(dds, normalized=TRUE)
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Hi Michael, I have tried what you suggested. I started with methylation loci. I created segment1 and segment2 but how to combine them bec…
Comment: EGSEA usage with microarray data (with vooma)?
by
Chris
• 0
Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
> Any suggestions for methylation data segmentation? I think the same segmentation can be used.
Comment: deseq2 results
by
swbarnes2
★ 1.3k
Cross-posted https://www.biostars.org/p/9594331/#9594458
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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