Bioconductor Forum

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bioconductor vcf

8.7 years ago bkauf • 0

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R

updated 8.7 years ago by Steve Lianoglou ★ 13k • written 8.7 years ago by Jing Wang ▴ 10

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topgo go

8.7 years ago colaneri ▴ 30

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edgeR cummeRbund

8.7 years ago alakatos ▴ 130

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heatmap R bioconductor

10.4 years ago • updated 8.7 years ago Deepak Tanwar ▴ 10

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gosim gosemsim

updated 8.7 years ago by Lluís Revilla Sancho ▴ 760 • written 10.2 years ago by s.apocarpum ▴ 10

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edger differential gene expression rnaseq

updated 8.7 years ago by Gordon Smyth 53k • written 8.7 years ago by gabriel.rosser ▴ 20

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dexseq

8.7 years ago badribio • 0

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GenomicFeatures

updated 8.7 years ago by Hervé Pagès 16k • written 8.7 years ago by matt.chambers42 ▴ 10

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metagenomeseq

updated 8.7 years ago by Joseph Nathaniel Paulson ▴ 280 • written 8.7 years ago by handibles ▴ 20

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mulcom error differential gene expression microarray

8.7 years ago arronar • 0

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limma edger rnaseq

8.7 years ago mousheng xu ▴ 10

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diffhic estimate dispersion value glm no replicates deseq

updated 8.7 years ago by Aaron Lun ★ 29k • written 8.7 years ago by hwick1 ▴ 20

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RUV single cell batch effect

8.7 years ago ribioinfo ▴ 100

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limma GEOquery affy

updated 8.7 years ago by James W. MacDonald 68k • written 8.7 years ago by carine.genet • 0

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deseq2

updated 8.7 years ago by Michael Love 43k • written 8.7 years ago by Pet Chiang ▴ 30

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deseq2 rangedsummarizedexperiment grangeslist

8.8 years ago • updated 8.7 years ago layal8785 • 0

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cummerbund heatmap isoforms transcript_id

8.7 years ago domenico.somma • 0

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limma

updated 8.7 years ago by Gordon Smyth 53k • written 8.7 years ago by chris86 ▴ 420

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limma

updated 8.7 years ago by Gordon Smyth 53k • written 8.7 years ago by nia ▴ 30

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variantannotation annotationhub

8.7 years ago Bogdan ▴ 670

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voom limma-voom tximport edger

updated 8.7 years ago by Ryan C. Thompson ★ 7.9k • written 8.7 years ago by johnmcma ▴ 10

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deseq2 multiple time points paired samples

8.7 years ago lironyoffe • 0

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limma limma voom paired samples

updated 8.7 years ago by Ryan C. Thompson ★ 7.9k • written 8.7 years ago by gstone2 • 0

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CNV minfi preprocessing dna methylation

8.7 years ago Thomas • 0

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limma batch effect covariates contrast differential gene expression

8.7 years ago mheydarpour ▴ 10

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genomicranges

updated 8.7 years ago by Michael Lawrence ★ 11k • written 8.7 years ago by Jake ▴ 90

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bioconductor dev

8.7 years ago stackexchange • 0

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Normalization Cancer probe affy PROcess Normalization Cancer probe affy PROcess

updated 8.7 years ago by jacorvar ▴ 40 • written 19.3 years ago by Schwartz, Donald ▴ 20

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reactomepa

8.7 years ago juls • 0

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goseq

updated 8.7 years ago by edmund.wright • 0 • written 8.8 years ago by colaneri ▴ 30

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protein interaction analysis BLI SPR sensorgram Biacore

updated 8.7 years ago by idomtamir ▴ 10 • written 10.9 years ago by vladimir.vigdorovich • 0

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RMA normalization

8.7 years ago nia ▴ 30

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featurecounts

updated 8.7 years ago by Wei Shi ★ 3.6k • written 8.7 years ago by Glihm • 0

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tcgabiolinks tcga tcgadownload gdcprepare gdc

updated 8.7 years ago by Tiago Chedraoui Silva ▴ 260 • written 8.9 years ago by enigmargs • 0

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limma limma-voom limma paired analysis limma contrast matrix

updated 8.7 years ago by Aaron Lun ★ 29k • written 8.7 years ago by gregory.l.stone ▴ 10

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minfi

8.7 years ago Jenny Drnevich ★ 2.0k

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metagenomeseq

updated 2.0 years ago by liqiong464 • 0 • written 8.7 years ago by handibles ▴ 20

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edger rnaseq

updated 23 months ago by Shaimaa Gamal • 0 • written 8.8 years ago by myprogramming2016 • 0

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flowclean flowQ bioconductor lattice

updated 8.7 years ago by Mike Smith ★ 6.6k • written 8.7 years ago by larisa.espinoza • 0

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footprinting centipede atac-seq dnaseq

8.7 years ago rbronste ▴ 60

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edger limma

updated 8.7 years ago by Aaron Lun ★ 29k • written 8.7 years ago by cronanz • 0

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deseq2 edger timecourse

8.8 years ago • updated 8.7 years ago anna_stavrinides ▴ 20

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edgeR Exploratory Data Analysis

updated 8.7 years ago by Gordon Smyth 53k • written 8.7 years ago by Dario Strbenac ★ 1.6k

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minfi bumphunter confounders

updated 8.7 years ago by James W. MacDonald 68k • written 8.7 years ago by gft219 • 0

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bioconductor hugene10sttranscriptcluster.db annotation

updated 8.7 years ago by James W. MacDonald 68k • written 8.7 years ago by Khawaja • 0

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deseq2 interaction model nested design

8.8 years ago • updated 8.7 years ago glocke01 ▴ 10

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mzr r installation

updated 8.7 years ago by Laurent Gatto 1.6k • written 8.8 years ago by microalgues • 0

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illuminahumanmethylationepicanno.ilmn10b.hg19 illuminahumanmethylationepicmanifest minfi limma 850k

8.8 years ago • updated 8.7 years ago ceciliebucher • 0

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minfi GenomicRanges

8.7 years ago cathy.philippe • 0