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News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
10 months ago • updated 4 weeks ago
shepherl
3.9k
0
votes
7
replies
746
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
11 weeks ago • updated 24 days ago
shepherl
3.9k
1
vote
8
replies
1.5k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.1 years ago by
shepherl
3.9k
1
vote
3
replies
1.3k
views
News:
European Bioconductor meeting 2019, 9 - 10 December in Brussels, Belgium
conference
EuroBioc
News
4.6 years ago
Laurent Gatto
1.6k
0
votes
3
replies
1.0k
views
News:
Final List of Deprecated Packages for Bioc3.11
software
annotation
experiment data
deprecated
News
updated 4.0 years ago by
kayla.interdonato
▴ 160 • written 4.1 years ago by
shepherl
3.9k
0
votes
5
replies
1.3k
views
News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
2.6 years ago • updated 2.1 years ago
shepherl
3.9k
4
votes
9
replies
3.0k
views
News:
Ensembl release 84 is out!
ensembl
mart
release84
biomart
ensembl release
News
updated 8.1 years ago by
arielpaulson
▴ 20 • written 8.2 years ago by
Thomas Maurel
▴ 800
7
votes
4
replies
1.7k
views
News:
Bioconductor 3.7 is released
bioconductor
release
News
written 6.0 years ago by
Valerie Obenchain
★ 6.8k
1
vote
2
replies
1.4k
views
News:
Final List of Deprecated Packages for Bioc3.12
annotation
software
experimentdata
deprecated
News
3.6 years ago
shepherl
3.9k
6
votes
6
replies
3.3k
views
News:
Bioconductor Git/GitHub Mirrors
git
github
git-svn bridge
subversion
News
updated 8.9 years ago by
Guangchuang Yu
★ 1.2k • written 8.9 years ago by
Dan Tenenbaum
★ 8.2k
7
votes
5
replies
3.0k
views
News:
European Bioconductor Developers Meeting: Cambridge 7/8th December 2015
developers
conference
workshop
News
updated 8.6 years ago by
Laurent Gatto
1.6k • written 8.7 years ago by
Mark Dunning
★ 1.1k
1
vote
2
replies
1.3k
views
News:
Registrations are now open for BioC Asia 2022
Asia
BioCAsia
Conferences
Events
News
19 months ago • updated 18 months ago
Peter Hickey
▴ 740
9
votes
4
replies
2.8k
views
News:
Experimental data package 'seqc'
seqc
rsubread
featurecounts
subjunc
ercc
News
9.5 years ago
Wei Shi
★ 3.6k
0
votes
2
replies
1.6k
views
News:
Final List of Deprecated Packages for Bioc3.10
annotation
experimentdata
deprecation
release
software
News
4.6 years ago • updated 4.5 years ago
shepherl
3.9k
0
votes
2
replies
1.3k
views
News:
Single Package Builder / New Package Submission
new submission
build report
packages
News
6.5 years ago
shepherl
3.9k
9
votes
8
replies
6.7k
views
News:
new package `ggtree` in devel branch
ggtree
phylogenetic
News
updated 9.3 years ago by
remi.tournebize
▴ 10 • written 9.3 years ago by
Guangchuang Yu
★ 1.2k
4
votes
11
replies
1.7k
views
News:
Bioconductor 3.8 is released
bioconductor
news
release
News
updated 5.4 years ago by
restat110
• 0 • written 5.5 years ago by
Valerie Obenchain
★ 6.8k
0
votes
2
replies
904
views
News:
List of Deprecated Packages for Bioc3.17
Bioconductor
Deprecation
Devel
devel
13 months ago • updated 11 months ago
shepherl
3.9k
20
votes
13
replies
3.5k
views
News:
markdown is coming to the support site
markdown
News
6.8 years ago • updated 6.2 years ago
Lucas Schiffer
▴ 240
0
votes
2
replies
1.6k
views
News:
ChIPpeakAnno::getAnnotation get Exons
chippeakanno
News
updated 9.1 years ago by
Ou, Jianhong
★ 1.3k • written 9.2 years ago by
Julie Zhu
★ 4.3k
0
votes
4
replies
1.2k
views
News:
European Bioconductor Conference 2023 planning
Europe
Conference
EuroBioC
Events
News
updated 22 hours ago by
angelaesper43
• 0 • written 19 months ago by
Maria Doyle
▴ 70
2
votes
2
replies
1.5k
views
News:
Final List of Deprecated Packages for Bioc3.13
Workflow
Software
ExperimentData
Deprecation
3.4 years ago • updated 3.0 years ago
shepherl
3.9k
5
votes
5
replies
2.1k
views
News:
Ensembl 88 is out!
ensembl
ensembl mart
biomart
e!88
News
7.1 years ago
Thomas Maurel
▴ 800
0
votes
2
replies
1.0k
views
News:
List of Deprecated Packages for Bioc3.7
deprecate
News
updated 6.5 years ago by
flipdiving2017
• 0 • written 6.5 years ago by
shepherl
3.9k
5
votes
2
replies
1.4k
views
News:
BioC2019 talk/workshop/scholarship submission deadline MARCH 15
BioC2019
News
updated 5.2 years ago by
Julie Zhu
★ 4.3k • written 5.2 years ago by
Levi Waldron
★ 1.1k
9
votes
7
replies
3.1k
views
News:
Conference: BioC 2016: Where Software and Biology Connect, Stanford, 24-26 June
BioC2016
Conference
News
updated 7.9 years ago by
shepherl
3.9k • written 8.3 years ago by
Martin Morgan
25k
0
votes
1
reply
297
views
News:
Bioconductor 3.19 Release Schedule
Release
release
Software
10 weeks ago • updated 7 weeks ago
shepherl
3.9k
0
votes
1
reply
1.1k
views
News:
Single Package Builder Updates and Testing
packages
review
spb
News
6.4 years ago
shepherl
3.9k
13
votes
3
replies
2.2k
views
News:
Bioconductor teaching week
teaching
Carpentries
written 21 months ago by
Laurent Gatto
1.6k
0
votes
1
reply
868
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
4.4 years ago
shepherl
3.9k
9
votes
1
reply
2.3k
views
News:
Ensembl release 80 is out!
biomart
Ensembl
zebrafish
Rat
1000 genomes phase 3
News
updated 9.0 years ago by
Sonali Arora
▴ 390 • written 9.0 years ago by
Thomas Maurel
▴ 800
1
vote
2
replies
789
views
News:
Ensembl 108 has been released!
biomaRt
ensembldb
ensembl
written 19 months ago by
Louisse
▴ 10
10
votes
2
replies
932
views
News:
SUPPORT SITE UPGRADE COMPLETE
SupportSite
updated 3.6 years ago by
Steve Lianoglou
★ 13k • written 3.6 years ago by
shepherl
3.9k
0
votes
1
reply
978
views
News:
Deadline for devel branch 3.9 to pass R CMD build and R CMD check
release
devel
deadline
freeze
News
5.1 years ago
shepherl
3.9k
0
votes
1
reply
1.1k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
deprecation
release
News
4.8 years ago • updated 4.7 years ago
shepherl
3.9k
3
votes
5
replies
1.4k
views
News:
sorted the results of function dba.report in DiffBind R package
diffbind
News
updated 5.4 years ago by
Rory Stark
★ 5.2k • written 5.4 years ago by
bioqianyang
• 0
0
votes
1
reply
1.0k
views
News:
Community engagement and outreach award
bioconductor
bioc2020
award
community
News
written 3.9 years ago by
shepherl
3.9k
3
votes
1
reply
1.2k
views
News:
Bioconductor Mendeley Group
bioconductor
publication
News
updated 7.7 years ago by
taniaak062
• 0 • written 7.7 years ago by
Sean Davis
21k
0
votes
1
reply
1.2k
views
News:
List of Deprecated Packages for Bioc3.6
deprecate
News
6.7 years ago
shepherl
3.9k
1
vote
1
reply
1.1k
views
News:
SBGNview: Data Analysis, Integration and Visualization on 5000+ Pathways/3000+ Species
SBGNview
pathways
SBGNview.data
pathview
visualization
3.2 years ago
Luo Weijun
★ 1.6k
3
votes
6
replies
1.2k
views
News:
Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software
Bioconductor
Devel
devel
updated 14 months ago by
darrelvanhoy
• 0 • written 14 months ago by
shepherl
3.9k
0
votes
1
reply
1.2k
views
News:
Exploiting computational immunology to understand the immune system| Symposium
computational biology
immunology
bioinformatics
symposium
RIMLS
News
updated 7.4 years ago by
Maxim.Baranov
• 0 • written 7.4 years ago by
maximbaranov23
• 0
10
votes
15
replies
2.8k
views
News:
BioC 2017: Where Software and Biology Connect, 26 / 27 - 28 July, Boston, MA
conference
bioc2017
News
7.2 years ago • updated 6.8 years ago
Martin Morgan
25k
0
votes
2
replies
1.2k
views
News:
Final List of Deprecated Packages for Bioc3.7
deprecate
package
release
News
written 6.1 years ago by
shepherl
3.9k
4
votes
1
reply
3.8k
views
News:
Nominations for Bioconductor Awards!
Bioc2020
Bioconductor
Awards
Recognition
News
4.1 years ago • updated 4.0 years ago
shepherl
3.9k
8
votes
10
replies
2.1k
views
News:
Bioconductor 3.2 is released!
news
News
updated 8.6 years ago by
JunLVI
▴ 40 • written 8.6 years ago by
Dan Tenenbaum
★ 8.2k
0
votes
1
reply
743
views
News:
Bioconductor Scientific or Informatic Technology Advancement Award!
Recognition
Awards
Bioc2022
Bioconductor
written 2.1 years ago by
shepherl
3.9k
1
vote
3
replies
1.3k
views
News:
Initial List of Deprecated Package Bioc 3.9
package
deprecate
release
News
updated 5.5 years ago by
Wolfgang Huber
★ 13k • written 5.5 years ago by
shepherl
3.9k
0
votes
1
reply
1.4k
views
News:
OrgDbs in AnnotationHub
annotationhub
orgdb
News
6.5 years ago
shepherl
3.9k
1
vote
1
reply
1.8k
views
News:
New Master of Science in Quantitative and Computational Biology at University of Trento, Italy
computational biology
bioinformatics
teaching
master
News
updated 7.9 years ago by
Chloe2013025
• 0 • written 7.9 years ago by
enridomenici
▴ 10
495 results • Page
1 of 10
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Replies
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
JKim
• 0
The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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