Bioconductor Forum

3

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16

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featurecounts rsubread

updated 10 months ago by Robert • 0 • written 9.0 years ago by samuel collombet ▴ 140

4

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6

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heatmap r studio log2foldchange

updated 4.2 years ago by Steve Lianoglou ★ 13k • written 4.2 years ago by alirezabcsaeidi • 0

5

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6

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deseq2 results

updated 8.7 years ago by Michael Love 41k • written 8.7 years ago by jjinhyoungkim ▴ 20

32

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16

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tximport deseq2 TPM RPKM rnaseq

updated 6.0 years ago by luxeredias ▴ 20 • written 7.8 years ago by tangming2005 ▴ 190

3

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14

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deseq2 deseq

updated 9.4 years ago by Michael Love 41k • written 9.4 years ago by solgakar@bi.technion.ac.il ▴ 90

3

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5

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r granges dplyr error handling

updated 7.5 years ago by Mike Smith ★ 6.5k • written 7.5 years ago by Jurat Shahidin ▴ 80

0

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9

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updated 10.6 years ago by Steve Lianoglou ★ 13k • written 10.6 years ago by fran vino ▴ 40

15

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dnastringset

updated 8.5 years ago by Martin Morgan 25k • written 8.5 years ago by komal.rathi ▴ 120

1

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7

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dada2 GenomeInfoDbData

updated 6.8 years ago by jiangjing_ing • 0 • written 6.9 years ago by navlern • 0

0

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0

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Sequencing Microarray Genetics Visualization Network Bayesian Classification Clustering

13.9 years ago David Lyon ▴ 340

4

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14

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deseq2 deseq lfc lfcse standard error

updated 7.1 years ago by rraadd_8 • 0 • written 7.1 years ago by tootiki • 0

0

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10

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deseq2 outliers

6.4 years ago paul.alto ▴ 50

0

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10

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Microarray Microarray

updated 18.1 years ago by Wittner, Ben ▴ 290 • written 18.1 years ago by Marc Saric ▴ 70

13

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11

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edger

8.3 years ago ribioinfo ▴ 100

1

vote

10

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deseq2

updated 8.8 years ago by piensaglobalmente ▴ 10 • written 9.4 years ago by jport ▴ 10

6

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12

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deseq2 deseq counts rnaseq differential gene expression

updated 8.0 years ago by Michael Love 41k • written 8.0 years ago by wannes.nauwynck ▴ 10

7

votes

19

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org.Hs.eg.db

updated 2.8 years ago by insanhabib1996 • 0 • written 8.6 years ago by sjmonkley ▴ 40

11

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7

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deseq2

updated 2.5 years ago by Michael Love 41k • written 8.1 years ago by martin.hoelzer ▴ 20

18

votes

37

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17k

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limma illumina differential gene expression multiple comparisons design matrix

8.9 years ago • updated 8.8 years ago svlachavas ▴ 830

2

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3

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16k

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deseq2 statistical power independent filtering

9.4 years ago alejandro.colaneri ▴ 20

27

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13

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dada2

updated 14 months ago by Yoon Young • 0 • written 2.9 years ago by lh290 ▴ 60

13

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35

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rdavidwebservice david

updated 5.8 years ago by gevermalc • 0 • written 8.8 years ago by Vivek.b ▴ 100

10

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18

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deseq2 batch effect batch

4.9 years ago Mozart ▴ 30

7

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6

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featurecounts rsubread

updated 9.4 years ago by James W. MacDonald 65k • written 9.4 years ago by amoltej ▴ 10

17

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4

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granges genomicranges sort seqnames order

updated 9.0 years ago by yinghua ▴ 30 • written 9.5 years ago by enricoferrero ▴ 660

1

vote

6

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16k

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software error bioconductor

updated 8.5 years ago by Julie Zhu ★ 4.3k • written 8.5 years ago by Tiphaine Martin ▴ 40

2

votes

1

reply

16k

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limma

updated 6.2 years ago by SamGG ▴ 350 • written 6.2 years ago by ruppmz • 0

9

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5

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16k

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RSEM deseq2 expected_counts raw_counts

updated 2.8 years ago by Michael Love 41k • written 7.3 years ago by chudar.chudar ▴ 30

7

votes

5

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rgl mgcv nlme package installation

updated 8.2 years ago by Gordon Smyth 50k • written 8.2 years ago by jacorvar ▴ 40

3

votes

2

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biocLite

updated 3.5 years ago by Marcel Ramos 690 • written 3.5 years ago by jmagomez • 0

16

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13

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deseq2

updated 2.8 years ago by Ian ▴ 10 • written 3.7 years ago by linouhao ▴ 20

0

votes

4

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16k

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deseq2 rnaseq PCA

updated 9.1 years ago by Michael Love 41k • written 9.1 years ago by erin.gill81 ▴ 60

21

votes

13

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edger rnaseq

updated 9.5 years ago by James W. MacDonald 65k • written 9.5 years ago by candida.vaz ▴ 50

13

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8

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biomaRt ensembl GRCh37

updated 9.5 years ago by Thomas Maurel ▴ 800 • written 9.5 years ago by Pablo marin-garcia ▴ 90

7

votes

15

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deseq2 paired

updated 16 months ago by teabonng • 0 • written 9.5 years ago by hwillenbrock ▴ 20

3

votes

2

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RNASeq edgeR rpkm

updated 12 months ago by Gordon Smyth 50k • written 10.0 years ago by shirley zhang ★ 1.0k

7

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11

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package installation flowviz flowcore rcpp flow cytometry

updated 6.9 years ago by Martin Morgan 25k • written 6.9 years ago by nickflowcyto ▴ 50

3

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3

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rmarkdown rstudio knitr

7.5 years ago Jon Bråte ▴ 250

7

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4

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16k

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DESeqDataSetFromMatrix

2.9 years ago Gian ▴ 30

11

votes

1

reply

16k

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rnaseq deseq2

updated 8.5 years ago by Michael Love 41k • written 8.5 years ago by tony_cybercloud ▴ 20

0

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3

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DESeq DESeq

updated 11.2 years ago by Simon Anders ★ 3.7k • written 11.2 years ago by Guest User ★ 13k

0

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7

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15k

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Microarray GeneSpring Microarray GeneSpring

15.8 years ago Martin Bonke ▴ 40

0

votes

2

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limma limma

updated 2.1 years ago by Gordon Smyth 50k • written 19.4 years ago by Kimpel, Mark W ▴ 890

0

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2

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edgeR edgeR

updated 10.2 years ago by Koen Van den Berge ▴ 180 • written 10.2 years ago by Gordon Smyth 50k

7

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3

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edgeR differential expression normalization

updated 8.1 years ago by Aaron Lun ★ 28k • written 8.1 years ago by Sara ▴ 10

5

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2

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15k

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mapIds

2.8 years ago Bogdan ▴ 670

2

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5

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Microarray Regression limma Microarray Regression limma

updated 10.3 years ago by James W. MacDonald 65k • written 10.3 years ago by Matthew Thornton ▴ 350

11

votes

11

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15k

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apple m1 installation silicon

updated 2.3 years ago by Gordon Smyth 50k • written 2.8 years ago by Brian ▴ 90

14

votes

9

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deseq2 deseq rna-seq

9.3 years ago gavrielmatt ▴ 30

7

votes

1

reply

15k

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Microarray

updated 14 months ago by yr542 • 0 • written 10.0 years ago by jesus urbano ▴ 40