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How to extract the counts for non-split reads from paired end RNA-seq data?
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2.7 years ago barrypraveen • 0
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2.7 years ago f_rahmdani • 0
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biomaRt - NameSpace loading failed
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how to add an enrichment score to a kegg pathway enrichment analysis?
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2.7 years ago christian.dina • 0
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2.7 years ago christian.dina • 0
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HiCDCPlus extract_hic_eigenvectors() only works with larger bin sizes (> =250kb )?
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How to adjust plots generated using psygenet2r?
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DiffBind with ChIPseq from histone analysis: EdgeR or Deseq2?
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2.7 years ago Giulia • 0
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Specific versions of packages
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How to extract proteins from PCs in plot_pca in DEP package
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does anyone how to create rarefaction curves from a phyloseq object?
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Limma: Models containing an intercept and interactions with continuous variables.
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Am I able to add gene names/symbols to an enrichGO() output?
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2.8 years ago HELEN • 0
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How to identify the batch informations from the sample ID?
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2.8 years ago Manav • 0
1,000 results • Page 13 of 20
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Answer: segfault in edgeR glmQLFit by Gordon Smyth 53k
Dear Mark, Thank you for providing a reproducible example. I confirm that I can reproduce the segfault myself on my own computer. We will …
Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by aqeel • 0
Discover the pinnacle of Brazilian Jiu Jitsu gear at [Dragon][1] GI. [1]: https://dragongi.com/
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I refered you to the DiffVar package 11 months ago. Did you consider it? Your clarification makes it clear that your issue is not with lim…
Comment: How does contrasts.fit do in limma to extract comparisons with a model having in by jtsy6383 • 0
Thanks for the reply Gordon. I am also working on the project and have been tasked to reformulate and add some details. We're interested i…
Answer: How does contrasts.fit do in limma to extract comparisons with a model having in by Gordon Smyth 53k
The limma Users Guide explains how to test for interactions or to test for contrasts very easily. limma can work with any design matrix, bu…
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