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Comment: all variables in design formula must be columns in colData (Deseq2) error
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Galina
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thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error
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coldata_rat <- data.frame(conditions=..., batch=...)
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robersy
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Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
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Ken C
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Hi Michael, thanks a lot for your prompt reply!
Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
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Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
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