Showing : go.db • reset
4
votes
2
replies
2.8k
views
mapIds to get GO terms
annotationdbi go.db
updated 10.2 years ago by 25k • written 10.2 years ago by ▴ 10
4
votes
2
replies
4.4k
views
Cannot load or update GO.db
GO.db bioclite
10.8 years ago Steve Pederson ▴ 170
3
votes
1
reply
2.6k
views
Difference between enrichGO results and Enrichr website results
Pathways GO.db clusterProfiler
updated 19 months ago by ★ 4.1k • written 19 months ago by ▴ 10
3
votes
2
replies
1.3k
views
Relations used in GO.db GOBPANCESTOR
GO.db
updated 5.8 years ago by 68k • written 5.8 years ago by ▴ 10
3
votes
8
replies
3.3k
views
Problem using GOTERM[["x"]] from GO.db
GO.DB
updated 7.8 years ago by 25k • written 7.8 years ago by ▴ 10
3
votes
2
replies
3.5k
views
how to use select() to retrieve GO Biological Process Ancestors?
GO.db AnnotationDbi
updated 5.1 years ago by 25k • written 5.1 years ago by ★ 4.1k
3
votes
3
replies
1.7k
views
source of GO ontology and GO annotations in Bioconductor for GO.db
GO ontology GO.db
updated 7.4 years ago by • 0 • written 7.4 years ago by ▴ 10
2
votes
6
replies
5.2k
views
DiffBind installation doesn't work
diffbind go.db
10.7 years ago • updated 10.6 years ago Gary ▴ 20
2
votes
2
replies
1.7k
views
retrieve gene IDs from GO.db GO
GO GO.db
4.8 years ago decppced • 0
2
votes
5
replies
1.3k
views
How to retrieve gene ontology GO class from gene list?
GO.db goTools
updated 22 months ago by 68k • written 22 months ago by • 0
2
votes
1
reply
1.3k
views
Geno Ontology Analysis using gene symbol
GO.db Annotation Clusterprofile GeneOntology
updated 4.9 years ago by ▴ 780 • written 4.9 years ago by • 0
2
votes
17
replies
4.8k
views
Problem installing package, version of dependency issue
AnnotationDbi GO.db
updated 2.1 years ago by ▴ 760 • written 2.1 years ago by ▴ 50
2
votes
2
replies
1.4k
views
Troubles installing GO.db
go.db
updated 7.7 years ago by 25k • written 7.7 years ago by ▴ 20
2
votes
2
replies
2.3k
views
GO.db source obo file?
gene ontology gostats go.db ontologies
updated 7.5 years ago by 25k • written 7.5 years ago by • 0
2
votes
1
reply
4.4k
views
TERM2NAME for enricher if I have list of GO IDs
clusterProfiler GO.db
3.7 years ago Lucía ▴ 30
2
votes
5
replies
1.6k
views
Cannot find more than a 100 GO:CC ids on org.Hs.eg.db
org.Hs.eg.db annota org.Hs.eg. GO.db
updated 6.7 years ago by 68k • written 6.7 years ago by • 0
1
vote
6
replies
3.7k
views
what's the difference between this two AnnotationDbi::select type in GO select
GO.db AnnotationDbi
updated 4.5 years ago by • 0 • written 4.5 years ago by ▴ 40
1
vote
1
reply
2.2k
views
installing GO.bd for WGCNA
GO.db WGCNA
updated 5.2 years ago by 68k • written 5.2 years ago by • 0
1
vote
2
replies
2.5k
views
Help installing clusterProfiler
clusterProfiler DO.db GO.db lazy load fail
updated 5.7 years ago by 68k • written 5.7 years ago by • 0
1
vote
1
reply
1.8k
views
GO.db: searching for "top" GO term for list of terms
GO go.db
updated 7.5 years ago by 68k • written 7.5 years ago by • 0
1
vote
0
replies
842
views
Typo in GO.db manual reference
GO.db
2.8 years ago RuBBiT0 ▴ 10
1
vote
5
replies
6.3k
views
can not able to install go.db
go.db
updated 9.2 years ago by 25k • written 9.2 years ago by • 0
1
vote
2
replies
2.0k
views
GO.db for Bioconductor 3.17
GO.db devel
3.0 years ago Amanda D. Clark • 0
1
vote
2
replies
3.0k
views
Installation Error- GO.db
GO.db
updated 9.6 years ago by 68k • written 9.6 years ago by ▴ 10
1
vote
2
replies
2.2k
views
Error with untar2 that blocks the installation of GO.db on Windows (R 3.5, Bioc 3.8) for using clusterProfiler
go.db clusterprofiler
updated 7.2 years ago by 25k • written 7.2 years ago by ★ 1.1k
1
vote
10
replies
3.7k
views
Error installing Annaffy
affy annaffy go.db kegg.db
updated 8.9 years ago by 68k • written 8.9 years ago by • 0
1
vote
6
replies
2.0k
views
Does a given Bioconductor version always use the same version of a database, e.g. GO.db?
GO.db versioning
updated 4.1 years ago by 68k • written 4.1 years ago by • 0
1
vote
2
replies
1.4k
views
Getting list of genes enriched in each of Biological process terms
GOstats Go.db GeneOntology
4.9 years ago MOHAMMAD • 0
1
vote
1
reply
2.1k
views
How to install old version of GO.db in R
GO.db R
updated 9.6 years ago by 25k • written 9.6 years ago by • 0
1
vote
4
replies
1.9k
views
Trouble installing package GO.db
GO.db
updated 6.1 years ago by 68k • written 6.1 years ago by ▴ 10
0
votes
1
reply
920
views
Which species does GO.db use
GO.db annotationTools
updated 2.6 years ago by ▴ 760 • written 2.6 years ago by • 0
0
votes
0
replies
895
views
plotGOTermGraph connects all subtrees to the root node
GO.db GOstats
2.7 years ago RuBBiT0 ▴ 10
0
votes
4
replies
1.8k
views
topGO "argument is of length zero" error
GO.db topGO
updated 5.3 years ago by 68k • written 5.3 years ago by • 0
0
votes
2
replies
2.1k
views
Can't select GO from AnnotationHub orgDB packages
GO.db AnnotationHub OrgDB
updated 5.6 years ago by 68k • written 5.6 years ago by ★ 2.0k
0
votes
1
reply
2.0k
views
Error attaching GO.db package
GO.db loadnamespace annotation chippeakanno
updated 10.9 years ago by ★ 8.2k • written 10.9 years ago by ▴ 10
0
votes
1
reply
1.6k
views
GO.db/GOSim bugged or my bad?
go.db software error bug
updated 10.8 years ago by 16k • written 10.8 years ago by ▴ 10
0
votes
1
reply
1.7k
views
Gene Ontolology and Annotation
Gene Ontolology Annotation GO.db org.Sc.sgd.db org.Hs.eg.db
updated 10.1 years ago by ▴ 760 • written 10.1 years ago by • 0
0
votes
0
replies
2.9k
views
Trouble with GO.db - installation of package GO.db had non-zero exit status
software error GO.db
9.8 years ago christin.berlin • 0
0
votes
3
replies
2.0k
views
GO.db installation error
GO go.db
9.4 years ago cananhas • 0
0
votes
1
reply
1.5k
views
I cannot install the package GO.db
GO.db
9.3 years ago chisad • 0
0
votes
1
reply
2.3k
views
Windows fails to install package from source 'tar.gz', e.g., "GO.db"
go.db WGCNA
updated 9.0 years ago by 25k • written 9.0 years ago by ▴ 10
0
votes
2
replies
2.0k
views
GO.db will not download
GO.db
9.0 years ago MOD • 0
0
votes
3
replies
5.3k
views
ERROR: dependency 'AnnotationDbi' is not available for package 'GO.db'
bioconductor R go.db annotationdbi dependency
9.0 years ago Sidi.Ma • 0
0
votes
1
reply
2.2k
views
GO.db, pfma.db, KEGG.db
pfam go.db kegg.db
updated 8.4 years ago by 25k • written 8.4 years ago by • 0
0
votes
1
reply
3.0k
views
GO.db failure to install
software error go.db
8.0 years ago matt.a.bennett25890 • 0
0
votes
3
replies
1.7k
views
How to annotate gene ontologies based on Gene Symbols in R
GO.db annotate
8.0 years ago dusan.petrovic • 0
0
votes
0
replies
1.6k
views
GOstats install Error : .onLoad failed in loadNamespace() for 'GO.db'
gostats go.db
8.0 years ago crafy • 0
0
votes
1
reply
2.3k
views
Issue installing packages ATACseqQC and GO.db
GO.db biocinstaller package installation atacseqqc
updated 7.9 years ago by ★ 1.3k • written 7.9 years ago by • 0
0
votes
5
replies
2.1k
views
hyperGTest not working on custom annotation package
GOstats AnnotationDbi GO.db
updated 7.0 years ago by 68k • written 7.0 years ago by • 0
0
votes
5
replies
5.5k
views
Cannot install GO.db for R 3.6.1
GO.db R 3.6.1 source package
updated 6.6 years ago by 25k • written 6.6 years ago by • 0
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<a href=https://vavadacasinox.com/>vavadacasinox.com</a>
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try converting your files to the older mzXML format, which remains highly stable for XCMS. While waiting for large datasets to process, you…
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Hi @gordonsmyth, thank you a lot for very fast and valuable response. I edited the question to provide more details.
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I tend to use dpcCN(), because it more robust than dpc() to experiments with lots of samples and big differences between samples. You coul…
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Please see the example limpa analyses given at <http://github.com/smythlab/limpa>, especially the kidney cancer case study. limpa does not…
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A: Reference paper or resource for limma::diffSplice and edgeR::diffSpliceDGE metho
Answer: Which preprocessing steps are needed before running limpa?
Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ?
Answer: Which preprocessing steps are needed before running limpa?
Answer: Which preprocessing steps are needed before running limpa?
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