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1.1k
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Is there any reason to think that normalization (e.g. TMM) doesn't work well with samples that that have very different raw counts?
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Which samples to remove from analysis based on Cook's distance outliers plot
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champ.load IDAT files from subdirectories
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updated 2.5 years ago by ▴ 780 • written 2.5 years ago by • 0
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Can ChiPseeker be as highly customizable as "computeMatrix"? for example if I want to plot the distribution of genes on the TAD boundary?
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2.5 years ago 840842906 • 0
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analysis of DE and TF by CeTF
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Understandig listValues argument of DESEQ in multiple group comparisons
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Microarray Data - Matching Probe ID's to Gene Expression Symbols
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Subsetting DESeq when different cell types
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I need the pd.cytoscanhd.array.
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updated 2.5 years ago by ▴ 780 • written 2.5 years ago by ▴ 10
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2.5 years ago zh9118 • 0
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2.5 years ago Colm • 0
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Overlay points with EnhancedVolcano R
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2.5 years ago andrebolerbarros ▴ 20
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2.5 years ago stacy.genovese • 0
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how to extract and match information of two filein R
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2.5 years ago zuljiamel1991 ▴ 10
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edgeR Help: Getting no DGEs with an FDR < 0.05
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RNAseq high padj value from validated samples?
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2.5 years ago DJ_Han • 0
46,615 results • Page 58 of 933
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Comment: EuroBioC2024 abstract submission is open! by Finnianfly • 0
What specific requirements should be noted when preparing abstracts for presentation formats such as short talks, package demos, or posters…
Comment: Length of 'dimnames' [1] not equal to array extent by Francesco Silvestro • 0
Resolved the error message!
Comment: WGCNA analysis on RNAseq and proteoimcs data by sum31278 • 0
Hi sagigordon, Can you share how you performed WGCNA analysis for proteomics data? Thanks
Comment: European Bioconductor Conference 2023 planning by inadequate.peacock.iiag • 0
I once faced a dilemma similar to this when coordinating a smaller local event; despite initial hesitation, I learned invaluable skills and…
Comment: ROAST compare results with complex design by Gordon Smyth 52k
It's also worth pointing out that the syntax for `camera` and `mroast` is the same, so I wonder how OP did the earlier `camera` analysis.
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Answer: ROAST compare results with complex design
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
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