updated 8.0 years ago by
Paul Shannon
▴
470
•
written 8.5 years ago by
Johannes Rainer
★
2.0k
21
votes
24
replies
13k
views
5
votes
16
replies
2.3k
views
updated 6.6 years ago by
Robert Castelo
★
3.3k
•
written 6.6 years ago by
JasonL_Weirather
▴
10
0
votes
13
replies
1.9k
views
updated 6.0 years ago by
James W. MacDonald
65k
•
written 6.0 years ago by
balin
•
0
1
vote
13
replies
3.0k
views
8.8 years ago
Michael Dondrup
▴
10
0
votes
9
replies
3.4k
views
updated 8.8 years ago by
Bernd Fischer
▴
550
•
written 8.9 years ago by
wrob311
•
0
0
votes
7
replies
2.2k
views
updated 5.4 years ago by
nitesh.turaga
▴
140
•
written 5.5 years ago by
Lance Parsons
•
0
0
votes
6
replies
5.7k
views
1
vote
6
replies
4.1k
views
updated 7.7 years ago by
florian.hahne@novartis.com
★
1.6k
•
written 7.9 years ago by
Philip Lijnzaad
▴
160
0
votes
6
replies
1.9k
views
updated 9.0 years ago by
Michael Lawrence
★
11k
•
written 9.1 years ago by
chrarnold
•
0
3
votes
6
replies
1.1k
views
0
votes
5
replies
914
views
updated 5.4 years ago by
James W. MacDonald
65k
•
written 5.4 years ago by
Malcolm Cook
★
1.6k
1
vote
5
replies
1.9k
views
updated 7.8 years ago by
Mike Smith
★
6.5k
•
written 7.8 years ago by
klmr
•
0
0
votes
5
replies
1.3k
views
7.5 years ago
dondelelcaro
▴
10
1
vote
5
replies
588
views
updated 6 months ago by
Nat.Nataren
•
0
•
written 7 months ago by
Ed Siefker
▴
230
3
votes
5
replies
1.7k
views
updated 7.4 years ago by
Martin Morgan
25k
•
written 7.4 years ago by
Lluís Revilla Sancho
▴
730
3
votes
4
replies
1.2k
views
updated 7.1 years ago by
Martin Morgan
25k
•
written 7.1 years ago by
joelrrv
•
0
2
votes
4
replies
2.1k
views
updated 7.4 years ago by
James W. MacDonald
65k
•
written 7.4 years ago by
Philip Lijnzaad
▴
160
3
votes
4
replies
1.6k
views
7.3 years ago • updated 3.6 years ago
Lluís Revilla Sancho
▴
730
0
votes
4
replies
1.3k
views
5.3 years ago • updated 4.5 years ago
Jacques.van-Helden
•
0
0
votes
4
replies
1.4k
views
6.3 years ago
cristinapasi
•
0
0
votes
4
replies
1.7k
views
updated 7.0 years ago by
Mark Dunning
★
1.1k
•
written 7.0 years ago by
S. K.
•
0
3
votes
3
replies
2.6k
views
7.6 years ago • updated 7.5 years ago
shilin.zhao
▴
40
6
votes
3
replies
2.1k
views
updated 9.5 years ago by
Wei Shi
★
3.6k
•
written 9.5 years ago by
caufeminecraft
▴
20
0
votes
3
replies
1.3k
views
updated 8.5 years ago by
Hervé Pagès
16k
•
written 8.5 years ago by
Jenny Drnevich
★
2.0k
0
votes
3
replies
1.4k
views
8.7 years ago • updated 8.6 years ago
Robert K. Bradley
▴
40
2
votes
3
replies
1.2k
views
7.3 years ago
jcrodriguez
▴
20
1
vote
3
replies
1.2k
views
9.0 years ago
Johannes Rainer
★
2.0k
1
vote
3
replies
1.0k
views
5.9 years ago
elisheva.h02
•
0
0
votes
3
replies
899
views
5.4 years ago
António Miguel de Jesus Domingues
▴
510
3
votes
2
replies
1.4k
views
updated 7.0 years ago by
Robert Castelo
★
3.3k
•
written 7.0 years ago by
Sander Tan
▴
20
3
votes
2
replies
1.4k
views
updated 9.2 years ago by
Michael Love
41k
•
written 9.2 years ago by
Johannes Rainer
★
2.0k
3
votes
2
replies
1.6k
views
8.5 years ago • updated 8.4 years ago
Henning Redestig
▴
20
1
vote
2
replies
1.2k
views
8.0 years ago
Marcel Ramos
690
1
vote
2
replies
1.5k
views
updated 7.8 years ago by
Tiago C. Silva
▴
270
•
written 7.9 years ago by
Marcel Ramos
690
0
votes
2
replies
4.9k
views
updated 7.6 years ago by
Guangchuang Yu
★
1.2k
•
written 7.6 years ago by
asis.hallab
•
0
0
votes
2
replies
1.2k
views
1
vote
2
replies
1.9k
views
7.3 years ago
brt381
•
0
1
vote
2
replies
1.4k
views
updated 7.2 years ago by
Hervé Pagès
16k
•
written 7.3 years ago by
zach.charlop.powers
•
0
3
votes
2
replies
2.5k
views
updated 7.2 years ago by
Welliton de Souza
▴
70
•
written 7.3 years ago by
guus.steeg
▴
10
0
votes
2
replies
1.7k
views
7.2 years ago
jcrodriguez
▴
20
9
votes
2
replies
8.8k
views
updated 2.6 years ago by
Michael Love
41k
•
written 7.2 years ago by
falkohofmann
▴
10
1
vote
2
replies
1.2k
views
7.0 years ago
Michael Steinbaugh
▴
90
0
votes
2
replies
1.4k
views
updated 7.4 years ago by
Valerie Obenchain
★
6.8k
•
written 7.4 years ago by
Sean Davis
21k
3
votes
2
replies
1.9k
views
updated 6.2 years ago by
Hervé Pagès
16k
•
written 6.2 years ago by
xiaotong.yao23
▴
10
4
votes
2
replies
831
views
3.5 years ago
zhe
▴
20
0
votes
1
reply
830
views
updated 18 months ago by
James W. MacDonald
65k
•
written 18 months ago by
Kevin Coombes
▴
430
0
votes
1
reply
862
views
1
vote
1
reply
1.2k
views
1
vote
1
reply
1.0k
views
5.9 years ago
Ed Siefker
▴
230
0
votes
1
reply
1.1k
views
updated 5.7 years ago by
Martin Morgan
25k
•
written 5.8 years ago by
simon.andrews
•
0
Recent ...
Replies
Comment: Store output of matchPWM()
by
James W. MacDonald
65k
Here's a self contained reproducible example, using part of the example in `?matchPWM`
```
> library(Biostrings)
> data(HNF4alpha)
> libr…
Comment: DEseq2 coefficient
by
JKim
•
0
Hi Dr. Love,
I'm sorry to ask another question to my old post.
If the design isn't balanced, the interpretation of coefficients will be…
Comment: Store output of matchPWM()
by
mat149
▴
70
out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges")))
Error in do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) :
'…
Answer: Store output of matchPWM()
by
James W. MacDonald
65k
Something like this?
```
ind <- as.logical(sapply(hitlist, length))
out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges")))
…
Answer: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
This has been asked before, but with a multi factor design, the LFC for coefficient X adjust for the others, in a way that is often hard to…
Awards
• All
Popular Question to
tangming2005
▴
190
Popular Question to
Ian D.
▴
70
Popular Question to
junhui.li11
•
0
Scholar to
James W. MacDonald
65k
Popular Question to
jeffrey.maurer
•
0
Locations
• All
United States, 2 minutes ago
United States, 2 minutes ago
United States, 4 minutes ago
United States, 12 minutes ago
San Diego, 15 minutes ago
United States, 2 minutes ago
United States, 2 minutes ago
United States, 4 minutes ago
United States, 12 minutes ago
San Diego, 15 minutes ago
Traffic: 674 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6