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1
reply
1.5k
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R package to change protein *.msf file to any readable file
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updated 5.2 years ago by ★ 1.4k • written 5.2 years ago by ▴ 20
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5.2 years ago Andrew • 0
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Installation of pcaGoPromoter fails
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updated 5.2 years ago by ★ 4.1k • written 5.2 years ago by • 0
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support for more genomes [igvR]
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5.2 years ago Apoorva ▴ 10
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5.2 years ago Mike ▴ 10
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Perform a biplot from pcaData and coldata in DESeq2, maybe PCAtools?
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Compare 3 RNASeq groups with no control in DESeq2
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5.2 years ago ecg1g15 ▴ 30
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updated 5.2 years ago by ★ 6.6k • written 5.2 years ago by • 0
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1
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986
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a BioC/R package that display the genome sequence/ mRNA exons/protein domains
AnnotationHubData
updated 5.2 years ago by ★ 4.0k • written 5.2 years ago by ▴ 670
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DiffBind:all samples have 0 counts for all genes.
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Cannot install ShortRead package
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How to generate custom annotation for rat genome rn6 in ChIPQC
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How do I merge a list of GRanges?
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Limma: Differential expression with two batch effects , location and batch.
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updated 5.2 years ago by 53k • written 5.2 years ago by • 0
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CRISPRseek Error in .Call2("solve_user_SEW0", start, end, width, PACKAGE = "IRanges") interpretation
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5.2 years ago • updated 5.0 years ago xenon ▴ 40
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5.2 years ago Saroop • 0
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Limma: Correct for location and batch effect
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updated 5.2 years ago by ★ 4.0k • written 5.2 years ago by • 0
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Bioconductor install error
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5.2 years ago Tess • 0
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Analyzing publicly available DESeq2 normalized counts for differential expression
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updated 5.2 years ago by 43k • written 5.2 years ago by • 0
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Use of RSEM counts in WGCNA
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5.2 years ago harelarik ▴ 60
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RNA gene expression data retrieval for breast cancer subtypes
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updated 5.2 years ago by ★ 4.0k • written 5.2 years ago by • 0
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How can I download all supported species information table of STRINGdb V11
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How to remove dendrogram from pheatmaps?
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updated 5.2 years ago by ★ 4.1k • written 5.2 years ago by • 0
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Warning: unable to access index for repository https://bioconductor.org/packages/3.11/data/annotation/bin/macosx/contrib/4.0
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written 5.7 years ago by ▴ 60
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two tracks have the same axis
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5.2 years ago 腾 • 0
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Create count matrix with featureCounts for stranded as well as reversely stranded, singles as well as paired-end libraries
rsubread
updated 5.2 years ago by • 0 • written 7.8 years ago by • 0
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DEXSeq - what is the best way to filter out low expressed exons / genes?
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5.6 years ago • updated 5.2 years ago aleksandar.baburski.g • 0
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when to use filter_by_cv() function from the lipidr package
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5.2 years ago eme • 0
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Is there currently something wrong with the rDGIdb API?
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5.2 years ago mike-zx • 0
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tissue specific differential expression using edgeR -- accounting for other effects in the model
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updated 5.2 years ago by ▴ 100 • written 5.2 years ago by • 0
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updated 5.2 years ago by 68k • written 5.2 years ago by • 0
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Normalization for within-sample gene correlation
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Clusterprofiler - best practise for missing ids
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5.2 years ago paun_bio • 0
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5.2 years ago rahnaman ▴ 10
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annotating gene for transcript type/biotype
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updated 5.2 years ago by 68k • written 10.2 years ago by ▴ 40
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5.2 years ago Robert Ivanek ▴ 750
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DECIPHER Probe Design Questions
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5.2 years ago henry1995910343 • 0
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p adjusted value not available
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updated 5.2 years ago by ★ 4.0k • written 5.2 years ago by • 0
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don't get an output of wigtoRangedData's function HMMcopy Package for detect CNV
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5.2 years ago El • 0
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flowCore - linear transformation
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5.2 years ago GFM ▴ 20
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2
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Beyond dmpFinder for methylation analysis, using limma for covariates
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updated 5.2 years ago by 53k • written 5.2 years ago by ▴ 20
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Fuzzy C means clustering
Mfuzz
updated 5.2 years ago by 68k • written 5.2 years ago by • 0
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problem in installing Bio conductor package
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updated 23 months ago by • 0 • written 5.2 years ago by • 0
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DiffBind reporting error
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updated 4.7 years ago by ★ 5.2k • written 5.2 years ago by • 0
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