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Latin American BioC Developers Workshop 2018
bioconductor
developers
bioc-devel
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6.1 years ago
Alejandro Reyes
★ 1.9k
3
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0
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1.7k
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News:
BioCAsia, 8 Sept 2015, Tokyo
sequencing
transcription
epigenomics
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infrastructure
News
8.9 years ago • updated 8.8 years ago
Matthew Ritchie
▴ 1000
3
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0
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1.0k
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News:
Save the Date Bioc2023!
Bioc2023
Conference
Bioconductor
18 months ago
shepherl
3.9k
3
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News:
EnsDb databases for Ensembl release 98 provide now also transcripts' GC content
annotation
ensembldb
EnsDb
AnnotationHub
News
4.5 years ago
Johannes Rainer
★ 2.0k
3
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1
reply
338
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News:
Bioconductor.org has a new look!
Bioconductor
Website
written 4 months ago by
shepherl
3.9k
2
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1
reply
294
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News:
"Edit" button not working
Bioconductor
Website
SupportSite
updated 3 months ago by
Lori
• 0 • written 4 months ago by
shepherl
3.9k
2
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0
replies
1.2k
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News:
LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
news
proteomics
course
training
msstats
News
6.3 years ago
mnchoi67
▴ 40
2
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0
replies
1000
views
News:
ensembl 96 gtfs and fasta twobits have been added to AnnotationHub
annotationdata
annotationhub
ensembl
gtf
2bit
News
updated 5.0 years ago by
nguyenlieuduoc
• 0 • written 5.1 years ago by
shepherl
3.9k
2
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0
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872
views
News:
ensembl 89 gtfs and fasta twobits have been added to AnnotationHub
bioconductor
annotationhub
ensembl89
News
6.9 years ago
shepherl
3.9k
2
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0
replies
833
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News:
Bioconductor Community Advisory Board Members
news
bioconductor oversight
community
News
4.1 years ago
Matthew Ritchie
▴ 1000
2
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0
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3.3k
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News:
Gencode GFF3 and FASTA files now available via AnnotationHub
AnnotationHub
Gencode
GFF3
FASTA
News
8.7 years ago
Sonali Arora
▴ 390
2
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1
reply
1.4k
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News:
Ensembl 91 is out!
ensembl
biomart
release
ensembl91
News
6.4 years ago
amonida
▴ 20
2
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1
reply
841
views
News:
Bioconductor Technical Advisory Board Nominees
bioconductor oversight
News
4.8 years ago
Martin Morgan
25k
2
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0
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1.1k
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News:
Bioconductor 3.9 release schedule
bioconductor
release
deadlines
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5.2 years ago
shepherl
3.9k
2
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0
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892
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News:
New Bioconductor Community Advisory Board Members for 2021
bioconductoroversight
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community
BiocVersion
3.1 years ago
Matthew Ritchie
▴ 1000
2
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0
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1.0k
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News:
Bioconductor Dockers Updated
bioconductor
docker
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7.0 years ago
shepherl
3.9k
2
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0
replies
726
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News:
News:Ensembl 106 has just been released!
ensembl
biomaRt
ensembldb
2.1 years ago
Benjamin
▴ 30
2
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1
reply
811
views
News:
BioC 2018: Poster / Talk / Scholarhip / Workshop deadline May 17!
BioC2018
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6.0 years ago
Martin Morgan
25k
2
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0
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255
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News:
Upholding our core values: a reminder of the Bioconductor Code of Conduct
Bioconductor
3 months ago
Maria Doyle
▴ 70
2
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3
replies
1.4k
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News:
List of Deprecated Packages for Bioc3.8
package
release
deprecate
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5.8 years ago
shepherl
3.9k
2
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0
replies
753
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Certificate ERROR resolved
website
bioconductor
News
4.6 years ago
shepherl
3.9k
2
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0
replies
830
views
News:
Bioc2018 Toronto: call for abstracts, workshop syllabi, special interest groups
bioc2018
News
6.2 years ago
Levi Waldron
★ 1.1k
2
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0
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851
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News:
Bioconductor Newsletter - July 2015
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news
News
8.9 years ago
Valerie Obenchain
★ 6.8k
2
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0
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1.7k
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News:
Ascona Workshop 2017 - Statistical Challenges in Single-Cell Biology: Deadline on 20 January
conference
single cell
statistical modeling
News
7.6 years ago • updated 7.3 years ago
Wolfgang Huber
★ 13k
2
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0
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1.2k
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News:
BioCAsia Virtual Meeting, 15-18 October 2020
news
conference
event
News
written 3.7 years ago by
Matthew Ritchie
▴ 1000
2
votes
0
replies
1.2k
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News:
ggtree published in MEE
ggtree
News
7.7 years ago
Guangchuang Yu
★ 1.2k
2
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0
replies
702
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News:
[CDSB] From Bioconductor users to developers: our first community submission
CDSB
News
4.2 years ago
Leonardo Collado Torres
★ 1.0k
2
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1
reply
2.1k
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News:
Changes to matchGenes in bumphunter
annotation
bumphunter
News
updated 9.4 years ago by
Michael Love
42k • written 9.4 years ago by
rafa
▴ 60
2
votes
0
replies
786
views
News:
Bioconductor Newsletter - October 2015
bioconductor
news
newsletter
News
8.6 years ago
Valerie Obenchain
★ 6.8k
2
votes
0
replies
725
views
News:
BioC2021 organizing committee
BioC2021
S4Vectors
3.5 years ago
Levi Waldron
★ 1.1k
2
votes
0
replies
1.2k
views
News:
Organizing Committee for BioC2020
conference
committee
Bioc2020
News
4.7 years ago
shepherl
3.9k
2
votes
5
replies
3.4k
views
News:
New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
profileplyr
ATACSeq
DiffBind
ComplexHeatmap
ChIPSeq
updated 17 months ago by
Junsik
• 0 • written 3.0 years ago by
Rory Stark
★ 5.2k
2
votes
0
replies
958
views
News:
[CDSB] Workshop 2020: Building workflows with RStudio and Bioconductor for single cell RNA-seq analysis
CDSB
Mexico
Workshop
News
4.2 years ago
Leonardo Collado Torres
★ 1.0k
2
votes
0
replies
1.4k
views
News:
Ascona Workshop 2019 - Statistical Challenges in Medical Data Science, 16-21 June 2019
workshop
News
5.6 years ago
Wolfgang Huber
★ 13k
2
votes
1
reply
1.7k
views
News:
Announcing a short course in computational and statistical proteomics
proteomics
massspectrometry
R
News
9.3 years ago
vitek.olga
▴ 20
2
votes
0
replies
499
views
News:
Bioconductor's Transition Away from Twitter/X
Bioconductor
6 months ago
Maria Doyle
▴ 70
2
votes
2
replies
1.0k
views
News:
Bioconductor Devel 3.11 Notification
software
bioconductor
packages
reports
News
4.5 years ago
shepherl
3.9k
2
votes
1
reply
746
views
News:
Results: Bioconductor Community Survey
community
feedback
News
4.3 years ago
Matthew Ritchie
▴ 1000
2
votes
0
replies
753
views
News:
New Package Submission Deadline for Bioc Release 3.8
release
package submission
News
5.6 years ago
shepherl
3.9k
2
votes
1
reply
2.1k
views
News:
BioCAsia, 5-6th December 2019, Sydney, Australia
news
training
conference
News
4.9 years ago
Peter Hickey
▴ 740
2
votes
2
replies
1.5k
views
News:
Final List of Deprecated Packages for Bioc3.13
Workflow
Software
ExperimentData
Deprecation
3.4 years ago • updated 3.0 years ago
shepherl
3.9k
2
votes
0
replies
1.4k
views
News:
Course: Analysis of RNA-seq and ChIP-seq data, March 29th - April 1st, Oeiras, Portugal
Course
workshop
News
8.2 years ago
Mark Dunning
★ 1.1k
1
vote
0
replies
1.2k
views
News:
complete set of OrgDb packages have been added to AnnotationHub
bioconductor
annotationhub
orgdb
News
6.9 years ago
shepherl
3.9k
1
vote
1
reply
1.4k
views
News:
Bioinformatics Summer School - July 2019 - UCLouvain (Belgium)
RNAseq
deseq2
proteomics
transcriptomics
workshop
News
written 5.2 years ago by
Laurent Gatto
1.6k
1
vote
1
reply
1.2k
views
News:
Ensembl 90 has been released
ensembl
biomart
ensembl90
release
News
6.7 years ago
Thomas Maurel
▴ 800
1
vote
0
replies
763
views
News:
Biological Data Science summer school 11-16 June in Brixen/Bressanone.
csama
13 months ago
Wolfgang Huber
★ 13k
1
vote
0
replies
1.0k
views
News:
New Package Submission Deadline for Bioc Release 3.12
release
new package
submission
deadline
News
3.6 years ago
shepherl
3.9k
1
vote
0
replies
803
views
News:
Ensembl 105 has just been released!
ensembl
biomaRt
ensembldb
2.4 years ago
mchakiachvili
▴ 20
1
vote
0
replies
870
views
News:
New Package Submission Deadline March 31
bioconductor
issue tracker
News
7.2 years ago
shepherl
3.9k
1
vote
0
replies
756
views
News:
Bioconductor Award for Outstanding Documentation
Bioc2021
Awards
Recognition
Bioconductor
3.0 years ago
shepherl
3.9k
495 results • Page
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Comment: STRINGdb : error with string_db$plot_network()
by
ninidea
• 0
> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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