Showing : STATISTICS • reset
0
votes
0
replies
241
views
Job: Statistics Lectureships at St Andrews
JobPosting computational statistics
3 months ago Andy Lynch ▴ 120
0
votes
0
replies
287
views
multipollutant models
statistics Regression r limma
6 months ago Jitendra ▴ 10
0
votes
1
reply
361
views
DEseq2 : Complex design with a mixture of male and female mice
statistics DESeq2
updated 6 months ago by 42k • written 6 months ago by • 0
1
vote
1
reply
393
views
Further analysis after limma regression output
statistics Epigenetics limma
updated 8 months ago by 66k • written 8 months ago by ▴ 10
1
vote
1
reply
1.5k
views
FPKM t-test vs DEseq2
DESeq2 statistics rna-seq
updated 14 months ago by ★ 4.2k • written 14 months ago by • 0
0
votes
3
replies
1.1k
views
batch effect in EPIC array data
statistics Epigenetics R
updated 16 months ago by ▴ 730 • written 16 months ago by ▴ 10
0
votes
0
replies
700
views
Job: PhD position in Bioinformatics in Jena
Statistics ComputationalBiology Aging MachineLearning
17 months ago alena.vanboemmel • 0
0
votes
2
replies
732
views
Results analysis of differential gene expression using DESeq2 package
RnaSeqSampleSize statistics DESeq2
updated 18 months ago by ★ 1.4k • written 18 months ago by • 0
1
vote
0
replies
678
views
Statistical test for genomic annotation by ChIPseeker
statistics PeakAnnotation ChIPseeker GuangchuangYu
22 months ago arisarkar88 ▴ 40
1
vote
0
replies
806
views
Job: Lecturer in Statistics - School of Mathematics and Statistics - University of St Andrews
computational teaching statistics research
22 months ago Andy Lynch ▴ 120
1
vote
0
replies
805
views
Job: Research Fellow in Prostate Cancer Proteomics (Bioinformatics/Stats/Data Analysis) - University of St Andrews
Multiomics Proteomics Cancer Statistics Bioinformatics
22 months ago Andy Lynch ▴ 120
0
votes
6
replies
1.4k
views
regression analysis for epic array methylation data using limma
limma Epigenetics STATISTICS R
2.1 years ago Jitendra ▴ 10
0
votes
3
replies
1.5k
views
Reading large file (15GB) in R
R Rstudio Bioconducter statistics
updated 2.3 years ago by 21k • written 2.4 years ago by ▴ 10
3
votes
5
replies
1.4k
views
P adjusted values in Deseq2
DESeq2 Statistics
written 3.4 years ago by • 0
0
votes
2
replies
1.1k
views
News: Ascona Workshop “Biological systems: from first principles to data-​driven modelling and back” 27. 3. - 1. 4. 2022
theory modeling statistics ascona Workshop
2.7 years ago • updated 16 months ago Wolfgang Huber ★ 13k
0
votes
0
replies
942
views
Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
singlecellRNA-Seq pathview statistics R
3.2 years ago • updated 3.1 years ago Luo Weijun ★ 1.6k
0
votes
0
replies
969
views
Job: Bioinformatician at MiroBio, Oxford, UK
Transcriptomics Bioconductor Statistics Job Biocon
3.3 years ago m.jackson • 0
0
votes
0
replies
937
views
Job: Scientist/Senior Scientist, Statistical Geneticist
Sequencing Genetics GeneticsPed statistics
3.4 years ago António Miguel de Jesus Domingues ▴ 510
0
votes
0
replies
1.1k
views
Job: Proteomics Bioinformatician
JobPosting Proteomics Statistics Job
3.5 years ago Laura • 0
0
votes
0
replies
943
views
Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
R statistics pathview singlecellRNA-Seq
3.6 years ago • updated 3.2 years ago Luo Weijun ★ 1.6k
1
vote
2
replies
1.1k
views
Re-calculation of Padj (P adjusted value)
statistics Benjamini–Hochberg procedure deseq2
updated 3.7 years ago by 42k • written 3.7 years ago by ▴ 60
2
votes
0
replies
885
views
Job: Multiple open positions in biomedical statistics at Eurac Research, Italy
epidemiology statistics bioinformatics Job
3.7 years ago Johannes Rainer ★ 2.1k
0
votes
0
replies
793
views
Job: Two Bioinformatics Fellowship Positions at US EPA
bioinformatics toxicology Job sequenicng statistics
3.9 years ago • updated 3.6 years ago whduke • 0
0
votes
0
replies
1.9k
views
Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
5.9 years ago • updated 3.6 years ago Luo Weijun ★ 1.6k
1
vote
0
replies
934
views
Job: Post-Doctoral Research Fellow, Cancer Genomics
genomics seattle bioinformatics data science statistics Job
4.1 years ago Fred Hutch (Recruiting) ▴ 40
3
votes
0
replies
2.2k
views
Job: Postdoctoral Scientist, Statistical Bioinformatics and Proteomics, WEHI Australia
job proteomics Job statistics
4.6 years ago • updated 4.5 years ago Gordon Smyth 51k
0
votes
0
replies
1.3k
views
Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
5.4 years ago • updated 4.5 years ago Luo Weijun ★ 1.6k
0
votes
1
reply
820
views
How to handle batch effect and interaction with experimental variables
deseq2 statistics differential expression
4.6 years ago A • 0
0
votes
1
reply
788
views
Exclude interaction terms from the design
deseq2 statistics modelling
updated 4.7 years ago by 42k • written 4.7 years ago by • 0
2
votes
2
replies
3.0k
views
How adjusted p-values are calculated in limma
limma r transcriptomics FDR statistics
updated 4.7 years ago by 51k • written 4.7 years ago by ▴ 10
0
votes
0
replies
1.0k
views
Proteomics data analysis with DEP no replicates
DEP Proteomics Statistics limma
4.8 years ago tatabox • 0
3
votes
3
replies
1.5k
views
Using alternative LFC shrinkage methods for computing p-values in DESeq2
deseq2 apeglm statistics
updated 5.0 years ago by 42k • written 5.0 years ago by • 0
0
votes
1
reply
1.0k
views
Efficient resampling in GENESIS or another Bioconductor GWAS package to obtain empirical p-values?
GENESIS GWAS resampling resample statistics
5.4 years ago naglemi ▴ 10
0
votes
0
replies
793
views
package for mismatch distribution?
genetics statistics
5.4 years ago myriam.croze07 • 0
1
vote
6
replies
2.8k
views
DESeq2 unbalanced sample size
deseq2 bioconductor bioinformatics statistics
updated 15 months ago by 42k • written 5.5 years ago by • 0
1
vote
2
replies
957
views
Newbie to all of this
bioconductor statistics
5.7 years ago sportwoo • 0
8
votes
8
replies
6.9k
views
Voom transformation from counts and normalization to negative values
rnaseq voom limma tcga statistics
updated 5.7 years ago by ★ 7.9k • written 5.7 years ago by ▴ 60
1
vote
2
replies
994
views
What to do with microarray probes that catch multiple genes?
affymetrix microarrays microarray probe statistics
updated 5.8 years ago by 66k • written 5.8 years ago by • 0
1
vote
4
replies
1.3k
views
Do the gene set statistics of the ROAST paper correspond to those implemented in the .roastEffects R function?
limma roast statistics source code gene set testing
5.8 years ago Andrea Carenzo • 0
0
votes
2
replies
1.2k
views
comparing two GOstats result lists
gostats statistics
updated 6.0 years ago by 66k • written 6.0 years ago by ▴ 20
1
vote
0
replies
1.2k
views
Job: Statistical Research Associate
biostatistics statistics sas git assay Job
6.1 years ago Fred Hutch (Recruiting) ▴ 40
0
votes
0
replies
1.2k
views
DSS DMLTest Prior Estimate of theta dispersion
DSS dmltest bayesian statistics methylation
6.2 years ago floriandeckert ▴ 30
0
votes
0
replies
1.1k
views
News: SCANGEN: Single-cell cancer genomics workshop at ISMB 2018
single cell cancer genomics statistics News
6.2 years ago kieranrcampbell ▴ 50
0
votes
0
replies
1.2k
views
Two questions about pathifier package
pathways statistics microarray
6.4 years ago arronar • 0
25
votes
7
replies
11k
views
Effect of lfcThreshold on p-value in DESeq2
deseq2 rnaseq statistics
updated 8 months ago by ▴ 10 • written 6.7 years ago by ▴ 30
2
votes
4
replies
1.2k
views
Removing batch effect on edgeR when interactons are looked at
rnaseq edger statistics model matrix
updated 6.7 years ago by ★ 13k • written 6.7 years ago by ▴ 90
0
votes
0
replies
1.2k
views
Assigning stats to differential peak locations relative to TSS
chipseeker chipseq statistics
6.7 years ago rbronste ▴ 60
0
votes
0
replies
1.6k
views
Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
7.3 years ago • updated 7.2 years ago Luo Weijun ★ 1.6k
1
vote
2
replies
2.1k
views
how to perform pre ranked GSEA in R?
r microarray statistics GSEA
updated 7.3 years ago by • 0 • written 9.3 years ago by ▴ 80
0
votes
0
replies
1.3k
views
Job: Bioinformaticist, Research Programmer
R genomics statistics Job
7.3 years ago radel • 0
50 results • Page 1 of 1
Recent ...
Replies
Comment: gds in GEOmetadb 2023-06-26 version is empty by Frederico Moraes Ferreira ▴ 100
Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz
Comment: Most enriched pathway is not expressed when modifying universe parameter by James W. MacDonald 66k
The default for `enrichGO` is to subset to those with a p-value<0.05. You don't adjust that default argument, so you shouldn't have any GO …
Answer: In a 3 group DEG analysis with three batches, can I use 1 group in all three bat by Michael Love 42k
You can compare A and C thanks to the sharing of samples from B across 1, 2 and 3.
Comment: Most enriched pathway is not expressed when modifying universe parameter by adripel • 0
In the enrichGO results we have significant and non-significant enriched terms that are displayed. So why would an enriched term (significa…
Answer: Design formula, numeric contrast, and lfcshrink in deseq2 by Michael Love 42k
For questions about how to construct the correct contrasts correspond to particular hypotheses, I recommend consulting with a local statist…
Votes
Comment: Most enriched pathway is not expressed when modifying universe parameter
Time-course, comparison of two groups
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
Answer: GESA with certain gene list returns no result with human genom, but many result
Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
Awards • All
Popular Question to swbarnes2 ★ 1.4k
Popular Question to Stephanie M. Gogarten ▴ 870
Popular Question to Jonathan ▴ 10
Popular Question to Frederico Moraes Ferreira ▴ 100
Popular Question to richardallenfriedmanbrooklyn ▴ 20
Locations • All
WEHI, Melbourne, Australia, 9 minutes ago
The city by the bay, 54 minutes ago
United States, 1 hour ago
United States, 2 hours ago
UPF, Barcelona, Spain, 2 hours ago
Traffic: 392 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6