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813
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Job: Statistics Lectureships at St Andrews
JobPosting computational statistics
22 months ago Andy Lynch ▴ 120
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723
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multipollutant models
statistics Regression r limma
2.1 years ago Jitendra ▴ 10
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1
reply
870
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DEseq2 : Complex design with a mixture of male and female mice
statistics DESeq2
updated 2.1 years ago by 43k • written 2.1 years ago by • 0
1
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1
reply
796
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Further analysis after limma regression output
statistics Epigenetics limma
updated 2.3 years ago by 68k • written 2.3 years ago by ▴ 10
1
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1
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3.2k
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FPKM t-test vs DEseq2
DESeq2 statistics rna-seq
updated 2.7 years ago by ★ 5.0k • written 2.7 years ago by ▴ 10
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3
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2.1k
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batch effect in EPIC array data
statistics Epigenetics R
updated 2.8 years ago by ▴ 760 • written 2.8 years ago by ▴ 10
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1.1k
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Job: PhD position in Bioinformatics in Jena
Statistics ComputationalBiology Aging MachineLearning
3.0 years ago alena.vanboemmel • 0
0
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2
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1.3k
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Results analysis of differential gene expression using DESeq2 package
RnaSeqSampleSize statistics DESeq2
updated 3.0 years ago by ★ 1.4k • written 3.0 years ago by • 0
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1.2k
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Statistical test for genomic annotation by ChIPseeker
statistics PeakAnnotation ChIPseeker GuangchuangYu
3.4 years ago arisarkar88 ▴ 40
1
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1.3k
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Job: Lecturer in Statistics - School of Mathematics and Statistics - University of St Andrews
computational teaching statistics research
3.4 years ago Andy Lynch ▴ 120
1
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0
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1.3k
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Job: Research Fellow in Prostate Cancer Proteomics (Bioinformatics/Stats/Data Analysis) - University of St Andrews
Multiomics Proteomics Cancer Statistics Bioinformatics
3.4 years ago Andy Lynch ▴ 120
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6
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2.1k
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regression analysis for epic array methylation data using limma
limma Epigenetics STATISTICS R
3.6 years ago Jitendra ▴ 10
0
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3
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2.2k
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Reading large file (15GB) in R
R Rstudio Bioconducter statistics
updated 3.8 years ago by 21k • written 3.9 years ago by ▴ 10
3
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5
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1.9k
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P adjusted values in Deseq2
DESeq2 Statistics
written 4.9 years ago by • 0
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2
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1.6k
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News: Ascona Workshop “Biological systems: from first principles to data-​driven modelling and back” 27. 3. - 1. 4. 2022
theory modeling statistics ascona Workshop
4.2 years ago • updated 2.9 years ago Wolfgang Huber ★ 13k
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1.6k
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Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
singlecellRNA-Seq pathview statistics R
4.8 years ago • updated 4.6 years ago Luo Weijun ★ 1.6k
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1.5k
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Job: Bioinformatician at MiroBio, Oxford, UK
Transcriptomics Bioconductor Statistics Job Biocon
4.8 years ago m.jackson • 0
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1.3k
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Job: Scientist/Senior Scientist, Statistical Geneticist
Sequencing Genetics GeneticsPed statistics
5.0 years ago António Miguel de Jesus Domingues ▴ 510
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1.5k
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Job: Proteomics Bioinformatician
JobPosting Proteomics Statistics Job
5.0 years ago Laura • 0
0
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0
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1.3k
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Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
R statistics pathview singlecellRNA-Seq
5.1 years ago • updated 4.8 years ago Luo Weijun ★ 1.6k
1
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2
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1.7k
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Re-calculation of Padj (P adjusted value)
statistics Benjamini–Hochberg procedure deseq2
updated 5.2 years ago by 43k • written 5.2 years ago by ▴ 60
2
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1.3k
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Job: Multiple open positions in biomedical statistics at Eurac Research, Italy
epidemiology statistics bioinformatics Job
5.3 years ago Johannes Rainer ★ 2.1k
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1.2k
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Job: Two Bioinformatics Fellowship Positions at US EPA
bioinformatics toxicology Job sequenicng statistics
5.4 years ago • updated 5.1 years ago whduke • 0
0
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2.3k
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
7.5 years ago • updated 5.1 years ago Luo Weijun ★ 1.6k
1
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0
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1.4k
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Job: Post-Doctoral Research Fellow, Cancer Genomics
genomics seattle bioinformatics data science statistics Job
5.6 years ago Fred Hutch (Recruiting) ▴ 40
3
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0
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3.2k
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Job: Postdoctoral Scientist, Statistical Bioinformatics and Proteomics, WEHI Australia
job proteomics Job statistics
6.1 years ago • updated 6.0 years ago Gordon Smyth 53k
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1.7k
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
6.9 years ago • updated 6.1 years ago Luo Weijun ★ 1.6k
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1
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1.3k
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How to handle batch effect and interaction with experimental variables
deseq2 statistics differential expression
6.1 years ago A • 0
0
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1
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1.2k
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Exclude interaction terms from the design
deseq2 statistics modelling
updated 6.2 years ago by 43k • written 6.2 years ago by • 0
2
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2
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4.6k
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How adjusted p-values are calculated in limma
limma r transcriptomics FDR statistics
updated 6.2 years ago by 53k • written 6.2 years ago by ▴ 10
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1.4k
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Proteomics data analysis with DEP no replicates
DEP Proteomics Statistics limma
6.3 years ago tatabox • 0
3
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3
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2.1k
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Using alternative LFC shrinkage methods for computing p-values in DESeq2
deseq2 apeglm statistics
updated 6.6 years ago by 43k • written 6.6 years ago by • 0
0
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1
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1.4k
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Efficient resampling in GENESIS or another Bioconductor GWAS package to obtain empirical p-values?
GENESIS GWAS resampling resample statistics
6.9 years ago naglemi ▴ 10
0
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0
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1.1k
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package for mismatch distribution?
genetics statistics
6.9 years ago myriam.croze07 • 0
1
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6
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3.7k
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DESeq2 unbalanced sample size
deseq2 bioconductor bioinformatics statistics
updated 2.8 years ago by 43k • written 7.0 years ago by • 0
1
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2
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1.3k
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Newbie to all of this
bioconductor statistics
7.2 years ago sportwoo • 0
8
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8
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8.9k
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Voom transformation from counts and normalization to negative values
rnaseq voom limma tcga statistics
updated 7.3 years ago by ★ 7.9k • written 7.3 years ago by ▴ 60
1
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2
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1.5k
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What to do with microarray probes that catch multiple genes?
affymetrix microarrays microarray probe statistics
updated 7.3 years ago by 68k • written 7.3 years ago by • 0
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4
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1.8k
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Do the gene set statistics of the ROAST paper correspond to those implemented in the .roastEffects R function?
limma roast statistics source code gene set testing
7.3 years ago Andrea Carenzo • 0
0
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2
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1.6k
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comparing two GOstats result lists
gostats statistics
updated 7.6 years ago by 68k • written 7.6 years ago by ▴ 30
1
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0
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1.6k
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Job: Statistical Research Associate
biostatistics statistics sas git assay Job
7.7 years ago Fred Hutch (Recruiting) ▴ 40
0
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0
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1.7k
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DSS DMLTest Prior Estimate of theta dispersion
DSS dmltest bayesian statistics methylation
7.7 years ago floriandeckert ▴ 30
0
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0
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1.6k
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News: SCANGEN: Single-cell cancer genomics workshop at ISMB 2018
single cell cancer genomics statistics News
7.7 years ago kieranrcampbell ▴ 50
0
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0
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1.6k
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Two questions about pathifier package
pathways statistics microarray
8.0 years ago arronar • 0
28
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7
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14k
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Effect of lfcThreshold on p-value in DESeq2
deseq2 rnaseq statistics
updated 2.2 years ago by ▴ 10 • written 8.2 years ago by ▴ 40
2
votes
4
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1.7k
views
Removing batch effect on edgeR when interactons are looked at
rnaseq edger statistics model matrix
updated 8.2 years ago by ★ 13k • written 8.2 years ago by ▴ 90
0
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0
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1.5k
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Assigning stats to differential peak locations relative to TSS
chipseeker chipseq statistics
8.2 years ago rbronste ▴ 60
0
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0
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2.0k
views
Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
8.9 years ago • updated 8.7 years ago Luo Weijun ★ 1.6k
1
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2
replies
2.5k
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how to perform pre ranked GSEA in R?
r microarray statistics GSEA
updated 8.8 years ago by • 0 • written 10.8 years ago by ▴ 80
0
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0
replies
1.6k
views
Job: Bioinformaticist, Research Programmer
R genomics statistics Job
8.8 years ago radel • 0
71 results • Page 1 of 2
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Comment: Ensembl site unresponsive via biomaRt by immellinda8 • 0
Fun, dramatic, and incredibly addictive [Poor Bunny][1] will make you laugh, scream, and keep you glued to the screen. Can you help the poo…
Comment: Limma-voom sample weights and impact on DEG numbers by rosarygaseous • 0
I have faced similar issues before, and often the problem comes down to package versions or R/Bioconductor compatibility. Make sure your R …
Comment: nice 3D displays for PCA analysis by adam80haynes • 0
That's a fascinating application of 3D printing in a scientific context. Using this technology to create custom lab equipment, models of mo…
Comment: Bioinformatician at the Lausanne University Hospital by TikTsokaasocissalpc • 0
The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …
Comment: DECIPHER DesignProbes unable to design FISH-probes by TikTsokaasocissalpc • 0
If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…
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Limma-voom sample weights and impact on DEG numbers
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
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