Bioconductor Granges

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GRanges bedpe structural variants rtracklayer

written 8.8 years ago by tangming2005 ▴ 200

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GRanges igraph

updated 22 months ago by Lluís Revilla Sancho ▴ 760 • written 22 months ago by Bogdan ▴ 670

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Granges GenomicRanges

updated 23 months ago by Michael Love 42k • written 23 months ago by d.s.h.andel-3 • 0

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IRanges GRanges NA

updated 2.1 years ago by ATpoint ★ 4.5k • written 2.1 years ago by Timucin • 0

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Sequencing SummarizedExperiment GRanges

2.2 years ago Marcus • 0

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lapply GRanges

updated 2.5 years ago by Hervé Pagès 16k • written 2.5 years ago by 16301050225 • 0

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granges seqlevels feature request

updated 2.5 years ago by story.benjamin ▴ 20 • written 7.5 years ago by Charles Plessy ▴ 180

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GRanges packages installation

updated 2.5 years ago by shepherl 4.1k • written 2.6 years ago by Eli • 0

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Views IRanges GRanges RleList

updated 3.1 years ago by Mike Smith ★ 6.6k • written 3.1 years ago by Assa Yeroslaviz ★ 1.5k

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promoter GenomicRanges rtracklayer GRanges

3.2 years ago Arslan • 0

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Seqnames makeGRangesFromDataFrame GRanges Subsetting GenomicRanges

3.4 years ago rtrivedi1 ▴ 10

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GRanges

updated 3.5 years ago by Malcolm Cook ★ 1.6k • written 3.5 years ago by Punjika • 0

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GRanges ORFik openreadingframe circulargenome findORFsFasta

updated 3.7 years ago by hauken_heyken ▴ 80 • written 3.7 years ago by levasseurmaxence • 0

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deseq2 annotation granges

updated 2.8 years ago by Nadine ▴ 60 • written 10.1 years ago by Darya Vanichkina ▴ 130

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Granges GenomicRanges

4.0 years ago rahnaman ▴ 10

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granges genomic ranges genbankr ensembldb

updated 4.1 years ago by James W. MacDonald 67k • written 4.1 years ago by biomiha ▴ 20

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regioneR granges iranges

updated 4.1 years ago by bernatgel ▴ 150 • written 4.5 years ago by Angel Liang • 0

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GRanges

updated 4.2 years ago by merv ▴ 140 • written 4.2 years ago by deepue ▴ 10

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GRanges GenomicRanges GenomicFeatures cdsByOverlaps DiffBind

updated 4.3 years ago by James W. MacDonald 67k • written 4.3 years ago by vanbelj ▴ 30

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GRanges IRanges

updated 4.5 years ago by James W. MacDonald 67k • written 4.5 years ago by omarrafiqued ▴ 50

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rtracklayer Rsamtools GAlignments GRanges metadata

updated 4.5 years ago by Hervé Pagès 16k • written 4.5 years ago by Robert ▴ 10

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rtracklayer genomicranges granges

updated 4.6 years ago by Michael Lawrence ★ 11k • written 4.6 years ago by ssabri ▴ 20

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genomicscores granges phastCons100way.UCSC.hg38 r rtracklayer

updated 5 days ago by rania.alanany • 0 • written 4.7 years ago by Biologist ▴ 120

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R GenomicRanges Granges

updated 4.7 years ago by Gordon Smyth 51k • written 4.7 years ago by ssabri ▴ 20

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bioconductor biostrings gc content biostring granges

updated 5.0 years ago by Hervé Pagès 16k • written 5.0 years ago by atotalamateur • 0

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12

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2.5k

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plyranges granges

updated 5.0 years ago by lee.s ▴ 70 • written 5.0 years ago by Konstantinos Yeles ▴ 80

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1.8k

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genomicranges granges grangeslist R

updated 5.2 years ago by James W. MacDonald 67k • written 5.2 years ago by new_user6 • 0

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Granges grangeslist

updated 5.3 years ago by balwierz ▴ 40 • written 9.1 years ago by vinod.acear ▴ 50

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GenomicRanges GRanges

5.4 years ago • updated 5.3 years ago Robert ▴ 10

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genomicranges granges gpos

updated 5.4 years ago by Hervé Pagès 16k • written 6.2 years ago by maltethodberg ▴ 180

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granges

updated 5.6 years ago by James W. MacDonald 67k • written 5.6 years ago by rhooads7 • 0

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1

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TxDb GRanges BSGenome variant annotation

updated 5.7 years ago by James W. MacDonald 67k • written 5.7 years ago by jacorvar ▴ 40

4

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1

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GRanges seqinfo import.bw BigWigFile rtracklayer

updated 5.7 years ago by Michael Lawrence ★ 11k • written 5.7 years ago by maltethodberg ▴ 180

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r granges promoter

updated 5.7 years ago by Hervé Pagès 16k • written 5.7 years ago by eggrandio • 0

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1

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r GRanges GenomicRanges

updated 5.7 years ago by James W. MacDonald 67k • written 5.7 years ago by Vinicius Henrique da Silva ▴ 40

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GRanges ChIPseeker annotatePeak TxDb EnsDb

updated 5.8 years ago by Johannes Rainer ★ 2.1k • written 5.8 years ago by foehn ▴ 100

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biostrings fasta genomicranges granges

updated 5.8 years ago by Martin Morgan 25k • written 5.8 years ago by Konstantinos Yeles ▴ 80

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granges rtracklayer

updated 5.8 years ago by James W. MacDonald 67k • written 5.8 years ago by ferbecneu • 0

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2.2k

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GenomicRanges GRanges GRangesList parallel mclapply

5.8 years ago foehn ▴ 100

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microarray minfi GenomicRatio GRanges Methylation

updated 5.8 years ago by James W. MacDonald 67k • written 5.8 years ago by lalchungnungabt17 • 0

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txdb txdb.hsapiens.ucsc.hg19.knowngene granges exons ucsc

updated 5.9 years ago by James W. MacDonald 67k • written 5.9 years ago by olavur ▴ 10

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1

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genomicranges granges

5.9 years ago Shaurya Jauhari • 0

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8

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9.7k

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granges genomicranges iranges subsetByOverlaps

updated 2.8 years ago by b.simpson • 0 • written 9.2 years ago by vinod.acear ▴ 50

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GRanges gene symbol IdeoViz

6.0 years ago Arman Shahrisa ▴ 20

2

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4

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1.6k

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granges

updated 6.0 years ago by Michael Lawrence ★ 11k • written 6.0 years ago by unamourdeswann ▴ 10

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meme ame motif dataframe granges

updated 6.1 years ago by Michael Lawrence ★ 11k • written 6.1 years ago by rbronste ▴ 60

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1

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1.2k

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genomicranges gpos granges

updated 6.1 years ago by Hervé Pagès 16k • written 6.2 years ago by maltethodberg ▴ 180

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3

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r granges grange

6.2 years ago g.k • 0

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2

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r granges genomicranges

updated 6.2 years ago by James W. MacDonald 67k • written 6.2 years ago by g.k • 0

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8

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1.7k

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granges plyranges

updated 6.2 years ago by Gordon Smyth 51k • written 6.2 years ago by Bogdan ▴ 670