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Returning gene functional annotations with gene symbols as input (using mygene Bioconductor package)
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Comment: gene Set with high AUC score but no cells assigned to cell type
by
eja.hdrer33ge.r.m
•
0
Understanding complex data results like those from AUCell can be challenging. For easier analysis and better data management on the go you …
Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames
by
ubjw24
•
0
Thank you for your replies. I got the problem solved by installing mutSignature with this line:
```
devtools::install_github("dami82/mutS…
Answer: DESeq2 design for haplotype MPRA
by
Michael Love
43k
> My goal is to identify which non-reference haplotypes are differentially active compared to the corresponding ref/ref haplotype within ea…
Answer: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames
by
James W. MacDonald
68k
It seems fine on devel as well.
```
> BSgenome.Hsapiens.UCSC.hg38
| BSgenome object for Human
| - organism: Homo sapiens
| - provide…
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