Showing : Error • reset
0
votes
3
replies
222
views
bioconductor.org not reachable from EU region
error http429 server
4 months ago ashu.upadhyay2206 • 0
0
votes
2
replies
182
views
Finding the correct version of DESeq2 for my version of R (3.6.1)
error DESeq2 Install
updated 6 months ago by 58k • written 6 months ago by • 0
1
vote
2
replies
837
views
error in DESeq2 results(dds)
DESeq2 datasetfrommatrix results error
6 months ago james • 0
4
votes
9
replies
1.5k
views
biomaRt - getBM; Error with obtaining a dataset from getBM() function
biomaRt error getBM
updated 3 months ago by ★ 5.1k • written 6 months ago by ▴ 20
2
votes
4
replies
543
views
R Error: package ‘GenomeInfoDb’ could not be loaded on MacBook
error mac DESeq2 GenomeInfoDb R
8 months ago • updated 7 months ago Dan ▴ 10
1
vote
1
reply
231
views
Errors in installing RforProteomics package
error RforProteomics Install
updated 9 months ago by ★ 5.1k • written 9 months ago by • 0
0
votes
1
reply
176
views
testClusters and trimClusters error in BiSeq
BiSeq testClusters error dmr
14 months ago akhaira • 0
6
votes
6
replies
338
views
Suggestion for next revision of edgeR User Guide re Design matrix setup
edger error
updated 15 months ago by 43k • written 15 months ago by • 0
0
votes
14
replies
443
views
annFUN error TOPGO
TOPGO annFUN error
updated 17 months ago by 3.4k • written 17 months ago by • 0
0
votes
0
replies
114
views
Error on FindOptimalBinning function
bhc error
18 months ago pavel.granalacant • 0
0
votes
0
replies
120
views
Multicollinearity and pR2Y =0.1
opls-da error multicollinearity
20 months ago adriana.roca-fernandez • 0
0
votes
1
reply
343
views
boxplot Error in Bioconductor
boxplot bioconductor R error
21 months ago l154359 • 0
0
votes
4
replies
296
views
nucleR ERROR unable to find an inherited method for function peakDetection for signature
nucleosome peaks error Job
updated 21 months ago by 58k • written 21 months ago by • 0
0
votes
5
replies
355
views
readTranscriptFeatures from genomation
R Rstudio Error readTranscriptFeatures genomation
updated 22 months ago by ▴ 20 • written 22 months ago by • 0
0
votes
3
replies
244
views
Error in E-Eb Limma package
limma error E-Eb
updated 23 months ago by 43k • written 23 months ago by • 0
4
votes
7
replies
397
views
bam files to hilbert curve
HilbertCurve error bamfiles GRobject
24 months ago adklts • 0
0
votes
1
reply
462
views
Help with installation of readat package
readat error
updated 2.1 years ago by 2.8k • written 2.1 years ago by • 0
2
votes
2
replies
607
views
TCGAbiolinks GDCprepare error
TCGAbiolinks GDCprepare error
updated 2.2 years ago by ▴ 150 • written 2.2 years ago by ▴ 10
0
votes
1
reply
492
views
R: oligo packages install error
oligo packages error
updated 2.2 years ago by 25k • written 2.2 years ago by • 0
0
votes
0
replies
293
views
Error in parseGenBank
genbankr parseGenBank gbk error
2.2 years ago ashley.dederich • 0
2
votes
3
replies
386
views
How can I overcome the error of "No residual degrees of freedom in linear model fits"?
limma microarray error
updated 2.2 years ago by ★ 1.5k • written 2.2 years ago by ▴ 70
0
votes
6
replies
1.1k
views
Error in getOneSeqFromBSgenomeMultipleSequences During singeR tutorial
error
2.2 years ago dfcarril • 0
0
votes
4
replies
742
views
DESeq2 compare all_vs_all levels error
deseq2 error RNAseq
updated 2.2 years ago by ▴ 850 • written 2.2 years ago by ▴ 20
0
votes
3
replies
254
views
Error in if (all(x <= minReadCount) & lambda <= minReadCount) { : missing value where TRUE/FALSE needed
cnmops cn.mops error
updated 2.2 years ago by 25k • written 2.2 years ago by • 0
0
votes
1
reply
344
views
DiffBind dba error
DiffBind dba R error
updated 2.1 years ago by ★ 4.1k • written 2.3 years ago by • 0
0
votes
8
replies
727
views
tximport command error
tx2gene txi error
updated 2.4 years ago by 58k • written 2.4 years ago by • 0
0
votes
6
replies
832
views
atacseqQC error while splittin the bamfile
ATACseqQC ATAC-seq error split bam file
updated 2.4 years ago by • 0 • written 2.4 years ago by • 0
2
votes
6
replies
420
views
EdgeR glmTreat error
edger error
updated 2.4 years ago by 58k • written 2.4 years ago by • 0
1
vote
1
reply
530
views
The query to the BioMart webservice returned an invalid result: biomaRt expected a character string of length 1
biomaRt error
updated 2.4 years ago by 58k • written 2.4 years ago by ▴ 10
0
votes
1
reply
325
views
Error in intramodularConnectivity(ADJ1, colorh1) : object 'colorh1' not found
error wgcna affymetrix data
updated 2.4 years ago by ★ 2.6k • written 2.4 years ago by • 0
2
votes
6
replies
676
views
featurecounts Rsubread ERROR on exon_id
R error software error Rsubread featurecounts
updated 2.5 years ago by ★ 3.3k • written 2.5 years ago by • 0
2
votes
3
replies
2.1k
views
DESeq2- preliminary study no replicates
deseq2 replicates error DESeqDataSetFromMatrix
updated 2.5 years ago by 34k • written 2.5 years ago by • 0
1
vote
1
reply
328
views
Error in getBM(c("affy_rice", "ensembl_gene_id", "entrezgene", "external_gene_name"), : could not find function "featureNames"
annotation error biomaRT affy ricedataset
updated 2.5 years ago by ★ 5.1k • written 2.5 years ago by • 0
1
vote
2
replies
791
views
Errors installing mzR package
proteomics error
updated 2.5 years ago by 1.5k • written 2.5 years ago by • 0
2
votes
5
replies
1.2k
views
GDCdownload does not work
GDCdow tcgabiolinks error tcgadownload download_error
updated 2.8 years ago by ▴ 260 • written 2.8 years ago by • 0
0
votes
1
reply
344
views
Linking PhosMap to issue number: 953
error github package contribution
updated 2.8 years ago by 25k • written 2.8 years ago by • 0
0
votes
2
replies
499
views
Biostrings: revComp error: Not compatible with STRSXP
biostrings Error Not compatible with STRSXP
2.8 years ago camille.4nier • 0
0
votes
6
replies
3.4k
views
Rhtslib - install error
Rhtslib installation error zlib
updated 24 months ago by • 0 • written 2.9 years ago by • 0
0
votes
1
reply
574
views
Conda Env & biocLite("affyio") : < undefined symbol: gzclose >
Conda affyio error
2.9 years ago benjamin.saintpierre • 0
0
votes
6
replies
569
views
DEsubs - Error in read.table during DEsubs command
DEsubs error
updated 3.1 years ago by • 0 • written 3.1 years ago by ▴ 10
0
votes
2
replies
644
views
Error in saving diffmeth data
error
3.2 years ago kjfilipski • 0
1
vote
5
replies
685
views
How do I stop DESeq2 from loading and additional errors related to the package.
r deseq2 error
updated 3.2 years ago by ▴ 980 • written 3.2 years ago by • 0
0
votes
0
replies
334
views
Error while extracting pseudo amino acid composition using protr
r source code error
3.3 years ago shreyasarkar0 • 0
5
votes
7
replies
1.9k
views
Gage package; go.gset() function error: argument "go_id" is missing
gage package error
updated 3.3 years ago by 58k • written 3.3 years ago by ▴ 20
0
votes
1
reply
497
views
Error: 'unknown input format' while trying http://bioconductor.org/packages/3.7/bioc
error oligo affy
3.3 years ago kritikamish99 ▴ 10
0
votes
1
reply
624
views
[metagenomeSeq] "Error: Warning sample with one or zero features" from cumNormStatFast
metagenomeseq cumNormStatFast features error
3.3 years ago jol.espinoz ▴ 40
1
vote
1
reply
432
views
Installing DESeq2 error: missing value where TRUE/FALSE needed
deseq2 error biocinstaller
updated 3.3 years ago by 25k • written 3.3 years ago by ▴ 10
3
votes
2
replies
980
views
Unable to install a Bioconductor package to local directory
error biocinstaller
updated 3.4 years ago by 58k • written 3.4 years ago by • 0
0
votes
3
replies
1.4k
views
Error when constructing DESeqDataSetFromMatrix (Error in round(assay(se)): non-numeric argument to mathematical function)
deseq2 R error
updated 3.5 years ago by 34k • written 3.5 years ago by • 0
0
votes
3
replies
1.2k
views
incorrect biomaRt output order of gene list
biomart ensembldb error
3.5 years ago Yuqia • 0
50 results • Page 1 of 1
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Answer: Undefined columns error R cytometry analysis by Jiang, Mike ★ 1.3k
I see you are trying to fill the missing transform info to `gs_bcell_auto` , which is a hack, but since you seems to know what you are doin…
Comment: how to get MFI stats from data by Jiang, Mike ★ 1.3k
Can you grant the public caccess to you fcs to reproduce your issue?
Answer: Getting a dataset that only contains the flow data within the gated area by Jiang, Mike ★ 1.3k
You didn't post your example code, so here is my best guess of your workflow > library(flowCore) > library(flowWorkspace) …
Comment: Diffbind dba.plotProfile attempt to select less than one element in OneIndex by bhanratt • 0
``` > DBA 10 Samples, 31953 sites in matrix: ID Tissue Factor Condition Replicate Reads FRiP 1 58 1 H3K4me3 AD …
Answer: Warning messages on Apple M1 BigSur by Vincent J. Carey, Jr. 6.5k
We are not producing M1 binaries at this time. If you use the intel version of R under Rosetta 2 you can use the intel mac binaries.
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Comment: Use of coef() as a measure of effect size in a multiple regression using DESeq2
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