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Error
•
reset
0
votes
7
replies
392
views
Centos 7.8, custom-compiled R-4.1: iPath_1.0.0 won't install
error
iPath
R
compilation
4 months ago
wjb2130
• 0
0
votes
2
replies
218
views
Error in TFBSTools at SitesetList
error
TFBSTools
R
6 months ago
HELEN
• 0
0
votes
3
replies
316
views
bioconductor.org not reachable from EU region
error
http429
server
13 months ago
ashu.upadhyay2206
• 0
0
votes
2
replies
394
views
Finding the correct version of DESeq2 for my version of R (3.6.1)
error
DESeq2
Install
updated 14 months ago by
James W. MacDonald
59k • written 14 months ago by
Mick
• 0
1
vote
2
replies
1.5k
views
error in DESeq2 results(dds)
DESeq2
datasetfrommatrix
results
error
15 months ago
james
• 0
4
votes
9
replies
2.1k
views
biomaRt - getBM; Error with obtaining a dataset from getBM() function
biomaRt
error
getBM
updated 11 months ago by
Mike Smith
★ 5.5k • written 15 months ago by
Zen
▴ 20
2
votes
4
replies
1.2k
views
R Error: package ‘GenomeInfoDb’ could not be loaded on MacBook
error
mac
DESeq2
GenomeInfoDb
R
16 months ago • updated 15 months ago
Dan
▴ 10
1
vote
1
reply
381
views
Errors in installing RforProteomics package
error
RforProteomics
Install
updated 18 months ago by
Mike Smith
★ 5.5k • written 18 months ago by
Phoebe
• 0
0
votes
1
reply
268
views
testClusters and trimClusters error in BiSeq
BiSeq
testClusters
error
dmr
23 months ago • updated 22 months ago
akhaira
• 0
6
votes
6
replies
494
views
Suggestion for next revision of edgeR User Guide re Design matrix setup
edger
error
updated 24 months ago by
Gordon Smyth
45k • written 24 months ago by
pdunn
• 0
0
votes
14
replies
781
views
annFUN error TOPGO
TOPGO
annFUN
error
updated 2.1 years ago by
Kevin Blighe
3.5k • written 2.1 years ago by
eleonora.porcu
• 0
0
votes
0
replies
193
views
Error on FindOptimalBinning function
bhc
error
2.2 years ago
pavel.granalacant
• 0
0
votes
0
replies
211
views
Multicollinearity and pR2Y =0.1
opls-da
error
multicollinearity
2.3 years ago
adriana.roca-fernandez
• 0
0
votes
1
reply
450
views
boxplot Error in Bioconductor
boxplot
bioconductor
R
error
2.4 years ago
l154359
• 0
0
votes
4
replies
432
views
nucleR ERROR unable to find an inherited method for function peakDetection for signature
nucleosome
peaks
error
Job
updated 2.4 years ago by
James W. MacDonald
59k • written 2.5 years ago by
anne.kannengiesser
• 0
0
votes
5
replies
565
views
readTranscriptFeatures from genomation
R
Rstudio
Error
readTranscriptFeatures
genomation
updated 2.5 years ago by
altuna akalin
▴ 20 • written 2.5 years ago by
hwaterma
• 0
0
votes
3
replies
325
views
Error in E-Eb Limma package
limma
error
E-Eb
updated 2.6 years ago by
Gordon Smyth
45k • written 2.6 years ago by
diego.orihuelatacuri
• 0
4
votes
7
replies
532
views
bam files to hilbert curve
HilbertCurve
error
bamfiles
GRobject
2.7 years ago
adklts
• 0
0
votes
1
reply
655
views
Help with installation of readat package
readat
error
updated 2.8 years ago by
shepherl
3.1k • written 2.8 years ago by
tbryson1
• 0
2
votes
2
replies
910
views
TCGAbiolinks GDCprepare error
TCGAbiolinks
GDCprepare
error
updated 2.9 years ago by
Tiago C. Silva
▴ 210 • written 2.9 years ago by
Talip Zengin
▴ 10
0
votes
1
reply
820
views
R: oligo packages install error
oligo
packages
error
updated 2.9 years ago by
Martin Morgan
25k • written 2.9 years ago by
get3232
• 0
0
votes
0
replies
391
views
Error in parseGenBank
genbankr
parseGenBank
gbk
error
2.9 years ago
ashley.dederich
• 0
2
votes
3
replies
480
views
How can I overcome the error of "No residual degrees of freedom in linear model fits"?
limma
microarray
error
updated 2.9 years ago by
Dario Strbenac
★ 1.5k • written 2.9 years ago by
Jurat Shahidin
▴ 70
0
votes
6
replies
1.8k
views
Error in getOneSeqFromBSgenomeMultipleSequences During singeR tutorial
error
2.9 years ago
dfcarril
• 0
0
votes
4
replies
971
views
DESeq2 compare all_vs_all levels error
deseq2
error
RNAseq
updated 2.9 years ago by
swbarnes2
★ 1.0k • written 2.9 years ago by
aishu.jp
▴ 20
0
votes
3
replies
427
views
Error in if (all(x <= minReadCount) & lambda <= minReadCount) { : missing value where TRUE/FALSE needed
cnmops
cn.mops
error
updated 2.9 years ago by
Martin Morgan
25k • written 2.9 years ago by
s1812756
• 0
0
votes
1
reply
589
views
DiffBind dba error
DiffBind
dba
R
error
updated 2.8 years ago by
Rory Stark
★ 4.4k • written 2.9 years ago by
annika-helverson
• 0
0
votes
8
replies
1.1k
views
tximport command error
tx2gene
txi
error
updated 3.0 years ago by
James W. MacDonald
59k • written 3.0 years ago by
eliztran
• 0
0
votes
6
replies
1.2k
views
atacseqQC error while splittin the bamfile
ATACseqQC
ATAC-seq
error
split bam file
updated 3.0 years ago by
contact
• 0 • written 3.1 years ago by
theodore.georgomanolis
• 0
2
votes
6
replies
553
views
EdgeR glmTreat error
edger
error
updated 3.1 years ago by
James W. MacDonald
59k • written 3.1 years ago by
lucap
• 0
1
vote
1
reply
625
views
The query to the BioMart webservice returned an invalid result: biomaRt expected a character string of length 1
biomaRt
error
updated 3.1 years ago by
James W. MacDonald
59k • written 3.1 years ago by
steppydeklin
▴ 10
0
votes
1
reply
416
views
Error in intramodularConnectivity(ADJ1, colorh1) : object 'colorh1' not found
error
wgcna
affymetrix data
updated 3.1 years ago by
Peter Langfelder
★ 2.6k • written 3.1 years ago by
pratikshasharma47
• 0
2
votes
6
replies
930
views
featurecounts Rsubread ERROR on exon_id
R
error
software error
Rsubread
featurecounts
updated 3.1 years ago by
Wei Shi
★ 3.4k • written 3.1 years ago by
edejong
• 0
2
votes
3
replies
2.5k
views
DESeq2- preliminary study no replicates
deseq2
replicates
error
DESeqDataSetFromMatrix
updated 3.1 years ago by
Michael Love
37k • written 3.1 years ago by
Yonatan Amzaleg
• 0
1
vote
1
reply
555
views
Error in getBM(c("affy_rice", "ensembl_gene_id", "entrezgene", "external_gene_name"), : could not find function "featureNames"
annotation
error
biomaRT
affy
ricedataset
updated 3.2 years ago by
Mike Smith
★ 5.5k • written 3.2 years ago by
pratikshasharma47
• 0
1
vote
2
replies
1.1k
views
Errors installing mzR package
proteomics
error
updated 3.2 years ago by
Laurent Gatto
1.5k • written 3.2 years ago by
pdaltron
• 0
2
votes
5
replies
1.7k
views
GDCdownload does not work
GDCdow
tcgabiolinks
error
tcgadownload
download_error
updated 3.4 years ago by
Tiago Chedraoui Silva
▴ 260 • written 3.4 years ago by
miki716
• 0
0
votes
1
reply
415
views
Linking PhosMap to issue number: 953
error
github package contribution
updated 3.4 years ago by
Martin Morgan
25k • written 3.4 years ago by
ecnuzdd
• 0
0
votes
2
replies
656
views
Biostrings: revComp error: Not compatible with STRSXP
biostrings
Error
Not compatible with STRSXP
3.5 years ago
camille.4nier
• 0
0
votes
6
replies
4.8k
views
Rhtslib - install error
Rhtslib
installation
error
zlib
updated 2.7 years ago by
leoadam014
• 0 • written 3.6 years ago by
boboshaq
• 0
0
votes
1
reply
654
views
Conda Env & biocLite("affyio") : < undefined symbol: gzclose >
Conda
affyio
error
3.6 years ago
benjamin.saintpierre
• 0
0
votes
6
replies
670
views
DEsubs - Error in read.table during DEsubs command
DEsubs
error
updated 3.7 years ago by
Panos Balomenos
• 0 • written 3.8 years ago by
Talip Zengin
▴ 10
0
votes
2
replies
852
views
Error in saving diffmeth data
error
3.8 years ago
kjfilipski
• 0
1
vote
5
replies
825
views
How do I stop DESeq2 from loading and additional errors related to the package.
r
deseq2
error
updated 3.9 years ago by
Axel Klenk
▴ 990 • written 3.9 years ago by
mdi3
• 0
0
votes
0
replies
435
views
Error while extracting pseudo amino acid composition using protr
r
source code
error
4.0 years ago
shreyasarkar0
• 0
5
votes
7
replies
2.1k
views
Gage package; go.gset() function error: argument "go_id" is missing
gage package
error
updated 4.0 years ago by
James W. MacDonald
59k • written 4.0 years ago by
Miskey, Csaba
▴ 20
0
votes
1
reply
583
views
Error: 'unknown input format' while trying http://bioconductor.org/packages/3.7/bioc
error
oligo
affy
4.0 years ago
kritikamish99
▴ 10
0
votes
1
reply
761
views
[metagenomeSeq] "Error: Warning sample with one or zero features" from cumNormStatFast
metagenomeseq
cumNormStatFast
features
error
4.0 years ago
jol.espinoz
▴ 40
1
vote
1
reply
568
views
Installing DESeq2 error: missing value where TRUE/FALSE needed
deseq2
error
biocinstaller
updated 4.0 years ago by
Martin Morgan
25k • written 4.0 years ago by
dfhannum
▴ 10
3
votes
2
replies
1.1k
views
Unable to install a Bioconductor package to local directory
error
biocinstaller
updated 4.0 years ago by
James W. MacDonald
59k • written 4.0 years ago by
tagirdzh
• 0
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Answer: RPX PXDataset error
by
Laurent Gatto
1.5k
- From the URL in the error, it looks like you have the latest (or a recent) `rpx` version. It is generally recommended to add the output o…
Answer: Package name already exists due to previous issue
by
shepherl
3.1k
This has been resolved. There needed to be a manual intervention by the core team to remove the old issue from the issue tracker database.…
Answer: Package name already exists due to previous issue
by
James W. MacDonald
59k
You should probably send this question to bioc-devel@r-project.org
Comment: edgeR - how to convert DGELRT and other classes to .csv files
by
Benjamin
• 0
Thank you Aaron. I am wondering if you know how to write the .csv file with both the topTags (statistical analysis) and the original counts…
Answer: error with: .make_splicings <- function(exons, cds, stop_codons=NULL)
by
James W. MacDonald
59k
That's a very old build, and an old version of the GFF standard. You would be better off getting something more recent. ``` > txdb <- m…
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Answer: Merging two plated in R
Answer: Merging two plated in R
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