Bioconductor Forum

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differential gene expression nanostring confounding factors

updated 7.1 years ago by James W. MacDonald 68k • written 7.1 years ago by Guillaume Robert • 0

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edger

updated 7.1 years ago by Aaron Lun ★ 29k • written 7.1 years ago by samoura48 • 0

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limma rsubread

updated 7.1 years ago by Gordon Smyth 53k • written 7.1 years ago by justinkablan225 ▴ 10

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metagenomeseq error metagenomeseq microbiome

7.1 years ago slizo001 • 0

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champ

7.1 years ago sinha.puja ▴ 10

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biostatistics bioinformatics data science Job

7.1 years ago l.tomalin1987 • 0

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methylation microarray illumina minfi methyanalysis

updated 7.1 years ago by Ou, Jianhong ★ 1.3k • written 7.1 years ago by Adam_M • 0

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flowworkspace

updated 7.1 years ago by Jiang, Mike ★ 1.3k • written 7.1 years ago by vonskopnik ▴ 10

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993

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software error

7.1 years ago sinha.puja ▴ 10

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timecourse deseq2 multiple factor design LRT

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by juditkovacsbio • 0

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BSgenome.Mmusculus tandem repeats TRF

updated 7.1 years ago by shepherl 4.3k • written 7.1 years ago by fusion.slope ▴ 10

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deseq2 normalization

7.1 years ago Maryam • 0

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rnaseq limma

updated 7.1 years ago by Aaron Lun ★ 29k • written 7.1 years ago by rsrzkk • 0

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diffhic gothic hicup hic-c hic

updated 7.1 years ago by Aaron Lun ★ 29k • written 7.1 years ago by mictadlo ▴ 10

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scater scran singlecellexperiment

updated 7.1 years ago by Aaron Lun ★ 29k • written 7.1 years ago by Abhishek Singh ▴ 20

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hic diffhic gothic hicup hic-c

7.1 years ago mictadlo ▴ 10

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S4Vectors R-3.5.1

7.1 years ago zhang303 • 0

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geoquery

updated 7.1 years ago by James W. MacDonald 68k • written 7.1 years ago by yurigorelik ▴ 10

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GenomicAlignments Biostrings

updated 7.1 years ago by Michael Lawrence ★ 11k • written 7.1 years ago by Robert Castelo ★ 3.4k

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RNA-seq deseq2 normalization readcount reverse

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by knholm • 0

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edger design model interaction model rnaseq

updated 7.1 years ago by James W. MacDonald 68k • written 7.1 years ago by cody0071 • 0

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software error topGO org.hs.eg.db

7.1 years ago natske ▴ 10

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txdb txdb.hsapiens.ucsc.hg19.knowngene granges exons ucsc

updated 7.1 years ago by James W. MacDonald 68k • written 7.1 years ago by olavur ▴ 10

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error github package contribution

updated 7.1 years ago by Martin Morgan 25k • written 7.1 years ago by ecnuzdd • 0

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msnbase

updated 7.1 years ago by Laurent Gatto 1.6k • written 7.1 years ago by garfield320 ▴ 30

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DESeq2 multiple factor design design model design matrix rna-seq

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by iammiso • 0

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chipseeker

7.1 years ago KKO • 0

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scRNA-seq SEURAT

updated 7.1 years ago by Steve Lianoglou ★ 13k • written 7.1 years ago by Bogdan ▴ 670

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R chip-seq histone chip-seq ggbio

7.1 years ago Ramiro Magno ▴ 100

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scater pca features

updated 7.1 years ago by Aaron Lun ★ 29k • written 7.1 years ago by jws • 0

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deseq2 LRT

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by takashi.k1201 • 0

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seqcat

updated 7.1 years ago by erikfas ▴ 30 • written 7.1 years ago by omeally • 0

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genomicranges granges

7.1 years ago Shaurya Jauhari • 0

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variantannotation

7.1 years ago Daniel Cameron ▴ 40

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deseq2 unmix

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by a.v.vliet • 0

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edger limma voom normalization limma

updated 7.1 years ago by James W. MacDonald 68k • written 7.1 years ago by Konstantinos Yeles ▴ 90

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GRange

updated 7.1 years ago by James W. MacDonald 68k • written 7.1 years ago by Danny • 0

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gviz grid layout

updated 7.1 years ago by Robert Ivanek ▴ 750 • written 7.1 years ago by alex.gos90 ▴ 10

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deseq2 sample size

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by kel.chee86 • 0

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genomicinteractions gviz interactionset

updated 7.1 years ago by liz.ingsimmons ▴ 140 • written 7.1 years ago by ferbecneu • 0

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deseq2 lfcshrink contrast

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by jurbach ▴ 10

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tcgabiolinks gdcprepare

updated 7.1 years ago by James W. MacDonald 68k • written 7.1 years ago by ansari.sarabio • 0

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diffbind news

7.1 years ago jingyaq ▴ 10

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deseq2 deseqdatasetfrommatrix rnaseq affy

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by matthew.sinton • 0

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biostrings Error Not compatible with STRSXP

7.1 years ago camille.4nier • 0

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rsamtools ggplot2 plot

updated 7.1 years ago by James W. MacDonald 68k • written 7.1 years ago by mictadlo ▴ 10

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heatmap.3 heatmap

updated 7.1 years ago by James W. MacDonald 68k • written 7.1 years ago by Ahdee ▴ 60

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scater R singlecellexperiment

updated 7.1 years ago by Aaron Lun ★ 29k • written 7.1 years ago by TJ • 0

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microarray hta2.0 arrayqualitymetrics

updated 7.1 years ago by Mike Smith ★ 6.6k • written 7.1 years ago by RV ▴ 10

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edger limma counts

updated 7.1 years ago by Gordon Smyth 53k • written 7.1 years ago by kaur • 0