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News:
ensembl 91 gtfs and fasta twobits have been added to AnnotationHub
annotationhub
ensembl
gtf
2bit
News
6.4 years ago
shepherl
3.9k
0
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0
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1.4k
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News:
C1omics: single-cell omics methods and applications, Manchester 24-25 Nov 2015
single cell
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workshop
News
8.6 years ago
Wolfgang Huber
★ 13k
7
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1
reply
1.4k
views
News:
Bioconductor Community Advisory Board Nominees
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community
bioconductor oversight
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updated 4.3 years ago by
Sean Davis
21k • written 4.3 years ago by
Matthew Ritchie
▴ 1000
3
votes
5
replies
1.4k
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News:
sorted the results of function dba.report in DiffBind R package
diffbind
News
updated 5.4 years ago by
Rory Stark
★ 5.2k • written 5.4 years ago by
bioqianyang
• 0
3
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0
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1.4k
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News:
List of Deprecated Packages for Bioc3.12
annotation
software
experiment data
deprecated
News
3.7 years ago • updated 3.6 years ago
shepherl
3.9k
2
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0
replies
1.4k
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News:
Ascona Workshop 2019 - Statistical Challenges in Medical Data Science, 16-21 June 2019
workshop
News
5.6 years ago
Wolfgang Huber
★ 13k
0
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0
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1.4k
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News:
Useful information about Ensembl release 77 mart databases
ensembl
biomart
Vervet-AGM
News
9.6 years ago
Thomas Maurel
▴ 800
0
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0
replies
1.4k
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News:
ChAMP2 is online
epigenetics
EPIC
450K
ChAMP
News
7.6 years ago
Yuan Tian
▴ 90
1
vote
2
replies
1.4k
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News:
Final List of Deprecated Packages for Bioc3.12
annotation
software
experimentdata
deprecated
News
3.6 years ago
shepherl
3.9k
0
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1
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1.4k
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News:
OrgDbs in AnnotationHub
annotationhub
orgdb
News
6.5 years ago
shepherl
3.9k
1
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1.4k
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News:
Ensembl 91 EnsDb databases added to AnnotationHub
annotation
ensembldb
ensembl
News
6.4 years ago
Johannes Rainer
★ 2.0k
3
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0
replies
1.4k
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News:
Course Material from Latest Bioconductor Course (Oct 27 -29, 2014)
course-material
Video
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9.6 years ago
Sonali Arora
▴ 390
2
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0
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1.4k
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News:
Course: Analysis of RNA-seq and ChIP-seq data, March 29th - April 1st, Oeiras, Portugal
Course
workshop
News
8.2 years ago
Mark Dunning
★ 1.1k
5
votes
2
replies
1.4k
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News:
BioC2019 talk/workshop/scholarship submission deadline MARCH 15
BioC2019
News
updated 5.2 years ago by
Julie Zhu
★ 4.3k • written 5.2 years ago by
Levi Waldron
★ 1.1k
2
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3
replies
1.4k
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News:
List of Deprecated Packages for Bioc3.8
package
release
deprecate
News
5.8 years ago
shepherl
3.9k
2
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1
reply
1.4k
views
News:
Ensembl 91 is out!
ensembl
biomart
release
ensembl91
News
6.4 years ago
amonida
▴ 20
1
vote
0
replies
1.4k
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News:
Git transition is on August 16th.
git
svn
News
6.8 years ago
nitesh.turaga
▴ 140
8
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2
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1.4k
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News:
BioCAsia, 29-30th November 2018, Melbourne, Australia
news
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updated 5.5 years ago by
Gordon Smyth
50k • written 5.7 years ago by
Steve Pederson
▴ 170
0
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0
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1.3k
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News:
Conference in mathematical and quantitative omics, May, 29th, London
conference
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9.2 years ago
Tiphaine Martin
▴ 40
0
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0
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1.3k
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News:
OmicCircos was updated
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omiccircos
News
9.2 years ago
Hu, Ying NIH/NCI [E]
▴ 50
0
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0
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1.3k
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News:
Initial List of Deprecated Packages for Bioc3.6
deprecate
EWCE
MAIT
stepwiseCM
onechannelgui
News
6.8 years ago
shepherl
3.9k
0
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2
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1.3k
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News:
Ensembl 103 has been released
biomaRt
ensembldb
Ensembl
ensemblVEP
Biomart
3.3 years ago • updated 3.0 years ago
mchakiachvili
▴ 20
1
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News:
Registrations are now open for BioC Asia 2022
Asia
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Conferences
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News
19 months ago • updated 18 months ago
Peter Hickey
▴ 740
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News:
OrgDb and TxDb packages have been added to AnnotationHub for Bioc 3.6
orgdb
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News
6.6 years ago
shepherl
3.9k
1
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3
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1.3k
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News:
European Bioconductor meeting 2019, 9 - 10 December in Brussels, Belgium
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EuroBioc
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4.6 years ago
Laurent Gatto
1.6k
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1.3k
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News:
Course Announcement: Use R / Bioconductor for Sequence Analysis (Intermediate Course)
Course
RNA-Seq
Chip-seq
Parallel
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9.2 years ago
Martin Morgan
25k
0
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0
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1.3k
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News:
May Institute Computation and statistics for mass spectrometry and proteomics
proteomics
mass spectrometry
biostatistics
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7.3 years ago
Laurent Gatto
1.6k
1
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0
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1.3k
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News:
Announcing the EnrichmentBrowser 2.0
genesetenrichment
functional enrichment
enrichmentbrowser
News
8.3 years ago
Ludwig Geistlinger
▴ 70
0
votes
0
replies
1.3k
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News:
Dockers have been updated for Bioc3.6 and Bioc3.7
docker
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6.5 years ago
shepherl
3.9k
6
votes
0
replies
1.3k
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News:
Winners of the 1st Shiny Contest: iSEE
iSEE
shiny
summarizedExperiment
News
5.1 years ago
Aaron Lun
★ 28k
0
votes
5
replies
1.3k
views
News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
2.6 years ago • updated 2.1 years ago
shepherl
3.9k
0
votes
0
replies
1.3k
views
News:
Ensembl 78 release is out!
Ensembl
Biomart
News
9.5 years ago
amonida
▴ 20
1
vote
0
replies
1.3k
views
News:
ensembl 90 ensembldb EnsDb databases have been added to AnnotationHub
ensemblb
ensembl
AnnotationHub
annotation
News
6.7 years ago
Johannes Rainer
★ 2.0k
1
vote
3
replies
1.3k
views
News:
Initial List of Deprecated Package Bioc 3.9
package
deprecate
release
News
updated 5.5 years ago by
Wolfgang Huber
★ 13k • written 5.5 years ago by
shepherl
3.9k
0
votes
0
replies
1.3k
views
News:
BioC 2015 Conference Posters
news
bioc2015
News
9.1 years ago
Valerie Obenchain
★ 6.8k
3
votes
0
replies
1.3k
views
News:
Updates to Bioconductor Dockers
docker
bioconductor
News
7.2 years ago
shepherl
3.9k
1
vote
1
reply
1.3k
views
News:
New Bioconductor Meetup Group in Boston -- first meeting September 6 2016
meetup
bioconductor
boston
longwood
News
7.8 years ago
Joseph Nathaniel Paulson
▴ 280
4
votes
1
reply
1.3k
views
News:
BioC2019 talks and workshops announced
bioc2019
News
5.1 years ago
Levi Waldron
★ 1.1k
0
votes
2
replies
1.3k
views
News:
Single Package Builder / New Package Submission
new submission
build report
packages
News
6.5 years ago
shepherl
3.9k
0
votes
0
replies
1.3k
views
News:
May Institute Computation and statistics for mass spectrometry and proteomics
conference
mass spectrometry
proteomics
News
4.4 years ago
shepherl
3.9k
0
votes
0
replies
1.2k
views
News:
Call for papers: Special issue on Statistical and Computational methods for genomics and integrative genomics
news
call
News
8.7 years ago
rancoita.paola
• 0
0
votes
1
reply
1.2k
views
News:
Interested in developing a new gene set enrichment tool ?
gene ontology
go analysis
gene set enrichment
gene set analysis
News
updated 6.8 years ago by
Martin Morgan
25k • written 6.8 years ago by
triZZla
• 0
1
vote
1
reply
1.2k
views
News:
Ensembl 90 has been released
ensembl
biomart
ensembl90
release
News
6.7 years ago
Thomas Maurel
▴ 800
3
votes
0
replies
1.2k
views
News:
Bioconductor 3.5 release
Bioconductor
release
news
News
7.2 years ago
Valerie Obenchain
★ 6.8k
0
votes
4
replies
1.2k
views
News:
European Bioconductor Conference 2023 planning
Europe
Conference
EuroBioC
Events
News
updated 19 hours ago by
angelaesper43
• 0 • written 19 months ago by
Maria Doyle
▴ 70
0
votes
1
reply
1.2k
views
News:
Exploiting computational immunology to understand the immune system| Symposium
computational biology
immunology
bioinformatics
symposium
RIMLS
News
updated 7.4 years ago by
Maxim.Baranov
• 0 • written 7.4 years ago by
maximbaranov23
• 0
2
votes
0
replies
1.2k
views
News:
LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
news
proteomics
course
training
msstats
News
6.3 years ago
mnchoi67
▴ 40
1
vote
0
replies
1.2k
views
News:
Bug found and fixed in bumphunter's bootstrap method
bumphunter
News
8.6 years ago
rafa
▴ 60
0
votes
1
reply
1.2k
views
News:
List of Deprecated Packages for Bioc3.6
deprecate
News
6.7 years ago
shepherl
3.9k
2
votes
0
replies
1.2k
views
News:
Organizing Committee for BioC2020
conference
committee
Bioc2020
News
4.7 years ago
shepherl
3.9k
495 results • Page
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Comment: STRINGdb : error with string_db$plot_network()
by
ninidea
• 0
> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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