0
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rsbml: use local installation of SOSlib
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3
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updated 7.1 years ago by ★ 5.2k • written 7.1 years ago by • 0
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SomaticSignatures package: how can I get probability of certain mutation type within a signature?
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Rgraphviz installation from source on Linux (Fedora 28) w BioC 3.8 -- failure
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7.1 years ago Martin Maechler ▴ 330
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edgeR. Known cancer genes are not differentially expressed?
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When should I use betaprior=T
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7.1 years ago nooshin ▴ 300
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DGE Analysis between 3 conditions
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News: Registration for BioC2019 in NYC now open
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make TxDb from list of genes
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1
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7
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how to retrieve all attributes from biomart ?
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updated 7.1 years ago by 68k • written 7.1 years ago by ▴ 30
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problem in loading Deseq2
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3
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Two microarrays merging (different experiments) - Error with esets (inSilicoMerging package)
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updated 7.1 years ago by 68k • written 7.1 years ago by • 0
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minfi R package for methylation analysis of infinium 450K microarray data
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updated 7.1 years ago by 68k • written 7.1 years ago by ▴ 10
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1
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1.6k
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how to save picture and add title to waterfall GenVisR mutation analyse?
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Can DEXSeq ouput be used directly as an input for IsoformSwitchAnalyzeR
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votes
5
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t-statistic from various limma-approaches does not follow the theoretical distribution
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7.1 years ago brynedal ▴ 40
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DESeq2 count outlier replacement from Cook's threshold
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updated 7.1 years ago by 43k • written 7.1 years ago by ▴ 10
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WGCNA: Matching eigengenes to samples
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7.1 years ago Jack • 0
0
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9
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mapping FASTQ files to single gene (fluorescent reporter)
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7.1 years ago A ▴ 60
2
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1
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Ensemble and Entrez disconnected?
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Post-hoc filtering on the standard deviation in proportions
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updated 7.1 years ago by 43k • written 7.1 years ago by • 0
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DESeq2: Analyzing just two normal+tumour pairs
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7.1 years ago mmokrejs • 0
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ReportingTools: Error using packet 1 arguments must have same length
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12
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Install rtracklayer with the Error undefined symbol: OPENSSL_init_ssl (system Centos7.3 R3.5.1 openssl-1.1.1)
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Help for Research Proposal
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ggbio won't plot ideogram in R version 3.3.1, ggplot2 version 3.1.0
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7.1 years ago t.fadason ▴ 10
2
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2
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edgeR DE analysis: single group combined factors or GLM with interaction term
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updated 7.1 years ago by ★ 29k • written 7.1 years ago by ▴ 10
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816
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how to retrieve gene id from topGO results
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7.1 years ago ycding ▴ 20
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2
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Get normalized COUNTS Deseq2
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Subset bam file in R
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updated 7.1 years ago by ★ 11k • written 7.1 years ago by • 0
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large range of LFC in DESeq2
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Bug in follow and precede
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updated 7.1 years ago by ★ 6.8k • written 7.1 years ago by • 0
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Data normalization and transformation using DESeq2
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Controlling numerical covariates: differential gene expression with limma voom
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non-integer counts for edgeR
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DESeq2 PCA plotting
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[clusterprofiler] Transformation from ENSEMBL ID to entrez ID or Symbol got reduced number of genes
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