Showing : package installation • reset
14
votes
21
replies
11k
views
Installing ShortRead - error: zlib not found even with zlib in LD_LIBRARY_PATH
package installation shortread dependency
updated 4.9 years ago by ▴ 240 • written 6.0 years ago by ▴ 60
0
votes
6
replies
1.7k
views
Illumina Methylation Manifest Install
Install biocinstaller package installation
6.0 years ago julieumn • 0
2
votes
3
replies
2.4k
views
hgu133plus2hsentrezgcdf or hgu133ahsentrezgcdf packages not installing
readaffy frma affy package installation hgu133a
6.1 years ago Chris Mancuso • 0
3
votes
3
replies
3.3k
views
problem reinstalling Bioconductor package 'clusterProfiler' after updating R to 3.4.0
clusterprofiler package installation r update
updated 6.9 years ago by ▴ 10 • written 7.0 years ago by ▴ 10
2
votes
5
replies
1.8k
views
[XPS]Installation of xps package in macOS Sierra
xps package installation
updated 7.2 years ago by 25k • written 7.2 years ago by • 0
0
votes
4
replies
2.7k
views
Windows 10 openCyto Install: installation path not writeable, unable to update packages: boot, Matrix, mgcv
bioclite openCyto package installation
updated 6.2 years ago by ★ 1.3k • written 6.6 years ago by ▴ 70
2
votes
3
replies
5.2k
views
Error during EBImage installation
ebimage ggtree package installation
updated 6.9 years ago by ▴ 750 • written 6.9 years ago by ▴ 10
4
votes
6
replies
4.4k
views
Cannot Install BSgenome.Hsapiens.UCSC.hg19
software error package installation
7.0 years ago alongalor ▴ 10
0
votes
2
replies
2.4k
views
failure to install Homo.sapiens
package installation
8.2 years ago david.cherba • 0
3
votes
2
replies
2.0k
views
Rsamtools use for R version 3.4.1
rsamtools package installation samtools
updated 6.4 years ago by 65k • written 6.4 years ago by ▴ 60
3
votes
5
replies
10k
views
Problem Installing limma package
limma software error installation package installation
updated 7.0 years ago by 50k • written 7.0 years ago by • 0
0
votes
13
replies
6.0k
views
Package installation error
parathyroidse package installation dependencies
updated 7.9 years ago by 16k • written 7.9 years ago by • 0
0
votes
3
replies
1.5k
views
flowCore install issues
flowcore package installation compilation error
7.4 years ago zimon.toutoune • 0
3
votes
2
replies
1.9k
views
Installation of MSA package fails
MSA package installation software error compilation error
updated 6.4 years ago by ▴ 290 • written 6.4 years ago by ▴ 10
2
votes
7
replies
3.3k
views
Bioconductor installing pakage error, R 3.4.2, Ubuntu 17.10
bioconductor biocinstaller package installation
6.5 years ago martyferr90 ▴ 20
1
vote
12
replies
3.2k
views
Problem in installing bioconductor
package installation
6.8 years ago nosheenfaiz09 • 0
0
votes
1
reply
848
views
Finding DOSE package for R3.3.3
R package installation
updated 7.0 years ago by 16k • written 7.0 years ago by • 0
0
votes
1
reply
924
views
Biseq installation error
biseq package installation r
updated 5.3 years ago by 25k • written 5.3 years ago by • 0
0
votes
1
reply
2.0k
views
GO.db won't install for using goseq package
GO.db goseq package installation error
updated 6.6 years ago by 25k • written 6.6 years ago by • 0
2
votes
5
replies
951
views
trouble in install DESeq2
deseq2 package installation
6.0 years ago yueli7 ▴ 20
7
votes
5
replies
16k
views
How to get rid of "Update all/some/none? [a/s/n]:"
rgl mgcv nlme package installation
updated 8.2 years ago by 50k • written 8.2 years ago by ▴ 40
0
votes
1
reply
1.5k
views
Errors installing RforProteomics
Bioc package installation rforproteomics
updated 8.2 years ago by 1.6k • written 8.2 years ago by • 0
0
votes
1
reply
771
views
PatientGeneSet installation problem
package installation
updated 8.1 years ago by ★ 8.2k • written 8.1 years ago by • 0
1
vote
7
replies
1.9k
views
Error installing cummeRbund/Rsamtools
cummerbund rsamtools package installation compilation error
8.1 years ago rainer.rutka ▴ 10
0
votes
3
replies
1.3k
views
Prevent biocLite() from asking to update packages every time it's used
bioclite package installation package updates
updated 8.0 years ago by 25k • written 8.0 years ago by ▴ 40
1
vote
3
replies
1.9k
views
Bioc 3.3 Windows 10 eiR package fails to install
software error R cheminformatics package installation eiR
updated 7.9 years ago by • 0 • written 7.9 years ago by • 0
0
votes
1
reply
1.2k
views
using flowIncubator package's function
opencyto flow cytometry R package installation
updated 7.8 years ago by ★ 1.3k • written 7.8 years ago by • 0
2
votes
10
replies
2.1k
views
Trouble Installing lifOver workflow
software error liftOver workflowinstall package installation
updated 7.6 years ago by 65k • written 7.6 years ago by • 0
7
votes
9
replies
2.9k
views
Install ggbio development version
ggbio development package installation
updated 7.5 years ago by 25k • written 7.5 years ago by ▴ 10
0
votes
7
replies
3.0k
views
BiocInstaller wants version of R that is not available yet
bioconductor error biocinstaller package installation install
updated 7.5 years ago by 25k • written 7.5 years ago by • 0
0
votes
1
reply
1.2k
views
can't find function "dba" in DiffBind
DiffBind dba package installation
7.5 years ago rebecca.spokony • 0
1
vote
2
replies
2.7k
views
Corrupt Database Error When Loading qvalue() Package
qvalue library software error package installation package updates
7.4 years ago tah340 • 0
0
votes
5
replies
1.4k
views
Problem to install "flowClust"
package installation software error flowclust
7.3 years ago cr • 0
1
vote
1
reply
1.3k
views
Changing R package dependencies
package installation dependencies bagfootr bagfoot
updated 6.5 years ago by 21k • written 6.5 years ago by ▴ 60
0
votes
1
reply
915
views
problem in installing IlluminaHumanMethylationEPICanno.ilm10b2.hg19
R software error package installation
updated 6.5 years ago by 65k • written 6.5 years ago by • 0
0
votes
1
reply
1.3k
views
Error installing flowDensity on latest docker container
R package installation docker
updated 6.4 years ago by 3.8k • written 6.4 years ago by • 0
0
votes
1
reply
1.4k
views
biocLite("lpsymphony") consistently fails with linker errors (can't find static libraries to link)
lpsymphony package installation bioclite
updated 6.4 years ago by ▴ 10 • written 6.4 years ago by • 0
0
votes
2
replies
5.0k
views
An Installing error that cannot open URL
software error package installation version
updated 6.4 years ago by 25k • written 6.4 years ago by • 0
0
votes
7
replies
1.3k
views
Installing RnBeads via bioconductor - .onLoad failed in loadNamespace(), call: NULL
package installation .onload
6.3 years ago nicogerstner • 0
0
votes
2
replies
1.1k
views
Installing DEseq packeges under windows10 , can't find library after succesful install
deseq2 package installation
updated 6.3 years ago by 41k • written 6.3 years ago by • 0
6
votes
2
replies
1.7k
views
Is there a way to tell biocLite() to install a Bioconductor package only if it is not installed already?
bioclite package installation installation install
updated 6.2 years ago by ★ 6.5k • written 6.2 years ago by ▴ 10
0
votes
5
replies
24k
views
package DESeq2 installation with R.
deseq2 R package installation
updated 2.9 years ago by 41k • written 6.1 years ago by • 0
0
votes
1
reply
1.6k
views
Issue installing packages ATACseqQC and GO.db
GO.db biocinstaller package installation atacseqqc
updated 6.1 years ago by ★ 1.3k • written 6.1 years ago by • 0
3
votes
2
replies
2.1k
views
Trouble installing bioconductor packages: ERROR: sub-architecture 'R' is not installed
package installation mac os x
updated 6.0 years ago by 25k • written 6.0 years ago by • 0
0
votes
1
reply
2.5k
views
TxDb.Hsapiens.UCSC.hg19.knownGen installation fail - non-zero exit status
software error package installation genomicfeatures
updated 5.8 years ago by 25k • written 5.8 years ago by • 0
0
votes
4
replies
2.2k
views
ChIPQC error: "non-zero exit status"
software error package installation chipqc txdb.hsapiens.ucsc.hg18.knowngene
updated 5.8 years ago by 25k • written 5.8 years ago by • 0
0
votes
1
reply
1.2k
views
Install Bioconductor package locally/temporarily
R rstudio package installation
updated 5.7 years ago by 25k • written 5.7 years ago by ▴ 20
0
votes
1
reply
1.7k
views
R says include dir is empty, but it's not.
R bioconductor biocinstaller package installation
updated 5.7 years ago by 25k • written 5.7 years ago by ▴ 20
0
votes
3
replies
2.4k
views
Support for devtools::install_version
package installation
5.7 years ago acekane1 • 0
5
votes
5
replies
2.2k
views
Is BiocInstaller::biocLite incompatible with withr::with_makevars?
biocLite package installation withr biocinstaller rhtslib
updated 5.7 years ago by 25k • written 5.7 years ago by ▴ 120
50 results • Page 1 of 1
Recent ...
Replies
Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
Awards • All
Popular Question to Leo Lahti ▴ 40
Scholar to James W. MacDonald 65k
Popular Question to shepherl 3.8k
Scholar to Michael Love 41k
Supporter to JKim • 0
Locations • All
France, 2 minutes ago
Singapore, 11 minutes ago
The city by the bay, 42 minutes ago
WEHI, Melbourne, Australia, 2 hours ago
Australia, 4 hours ago
Traffic: 607 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6